| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3606 |
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| Symbol | |
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| ID | 5749190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3965510 |
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| End bp | 3966547 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298707 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001564625 |
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| Protein GI | 160899043 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.020858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CTGCCCGTCT GCGCCTTGCG CTTGCATCGA TGGCCGCCCT CCTCACACTC
GCTGCCGCGC CCGCCCACGC TGGCAAGACG CTGGACGGCA TCAAGCAGCG CGGCGCCGTG
GCCTGCGGCG TGCACACGGG GCGCGCAGGC TTTGCGCTCG CCGACGGCAG CGGCAACTGG
TCCGGGCTGG ACGTGGATCT GTGCCGTGCC GTGGCTGCAG CCACCCTGGG CGACGCCAGC
AAGGTCAAGT TCATTCCCAC CAGCGGCCAG ACACGCATCA CGGCGCTGCA GTCCGGCGAG
ATCGATCTGC TGGCACGCAA CACCACCTGG ACCTTCACGC GCGACAACGG CCTGGGCCTG
ATGTGGGCGG GCATCAATTT CCACGACGGC CAGGGCTTCA TGGCCAGGAA GAAACCCGGC
CTGAACAGCG TCAAGCAGCT CTCTGGCGCC ACCATCTGCG TGATCAGCGG ATCCACCACG
GAAAAGACCC TGTCGGAGTA CTTTCGCGCC CACAAGCTCA ACTACAAGGC GGTGGTGTTC
GACAACCCCG AAGCGGCCCT GCAGGCCTTC AGCAGCGGAC GCTGCCAGGC CTATACAGGC
GACCTCGGCG CCCTGGCCGT GCTGCGCGGC AAGGAACTGG CCAACCCTGA CGACTACGTG
ATCCTGCCCG AAGTCATCTC CAAGGAGCCG GCCGGCCCGG CAGTGCGCCG CGGTGACGAC
GAATGGTTCG CCGTCGTGCG CTGGACACTC AACGCCATGA TCGAGGCCGA GGAACTGGGC
ATCACCCAAG CCAATGCCGA CGAGCTCAAG ACCCGCTCCG ACAGCATCCA GGTCAAGCGT
TTCCTGGGCC AGAGCGACGA CCTGGGCAAG CAGCTGGGGC TGGACAAGGA ATGGGCGCTG
CGCATCGTCA AGGCCGTGGG CAACTATGGC GAGAGCTATG AGCGCAACCT GGGCGCCAAG
TCCGGATTGA ACGTGCCGCG TGGCAAGAAC GCGCTGTTCA CCAAGGGCGG CCTGATGATG
TCGCCGCCGA TGAACTGA
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| Protein sequence | MNAPARLRLA LASMAALLTL AAAPAHAGKT LDGIKQRGAV ACGVHTGRAG FALADGSGNW
SGLDVDLCRA VAAATLGDAS KVKFIPTSGQ TRITALQSGE IDLLARNTTW TFTRDNGLGL
MWAGINFHDG QGFMARKKPG LNSVKQLSGA TICVISGSTT EKTLSEYFRA HKLNYKAVVF
DNPEAALQAF SSGRCQAYTG DLGALAVLRG KELANPDDYV ILPEVISKEP AGPAVRRGDD
EWFAVVRWTL NAMIEAEELG ITQANADELK TRSDSIQVKR FLGQSDDLGK QLGLDKEWAL
RIVKAVGNYG ESYERNLGAK SGLNVPRGKN ALFTKGGLMM SPPMN
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