Gene Daci_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3597 
Symbol 
ID5749181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3955597 
End bp3956262 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID641298698 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001564616 
Protein GI160899034 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0169924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0485989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCC ACACCTACTT CCGCTCGTCG GCCTCCTACC GCGTGCGCAT TGCGCTGCAG 
ATCAAGGGCC TGGACTATGA ATCCGTACCC GTGCACCTGC TGCGCGGCGA TCACAGGGCG
CCGGCCTATG CCCAGCATGT CGGCGATGCG CTGGTGCCGG CGCTGGAAAC CGAGGACGGC
CACTGGCTGA CCCAGTCCAT GGCCATCATC GAATATCTCG ATGAGACCCA TGCCGAAATA
CCGCTGCTGC CGCGCGACGC CCTGGGCCGT GCCCATGTGC GCGCGCTGGC CCAGATGGTG
GCCTGCGAGA TCCATCCGCT CAACAACCTG CGCGTGCTCA AGTACCTGGT GCGCAACCTG
GGTGTCTCCG ACGAGGCCAA GAGCGCCTGG TACGTGCATT GGGTGCGCTC CGGCCTGGAA
GCCTTCGAAC GCCAGCTGGA CTTGCTGGCC GCCGAGCGCG AAGCCGCAGG CCTGGCGCCT
TCGCTGTTTT GCTGGGGCGA CACGCCCACG CTGGCCGACT GCTGCCTGGT GCCGCAGATC
TTCAACGGCC GCCGCTTCAA CGTGAGCCTG GACGGCCTGC CGCGCCTGGC GGCCATCGTC
GATCGCTGCG AGGCGCTGCC GGCCTTCCAG AAGGCCCATC CCTCGGCCTG CCCCGACGCG
GAATGA
 
Protein sequence
MKLHTYFRSS ASYRVRIALQ IKGLDYESVP VHLLRGDHRA PAYAQHVGDA LVPALETEDG 
HWLTQSMAII EYLDETHAEI PLLPRDALGR AHVRALAQMV ACEIHPLNNL RVLKYLVRNL
GVSDEAKSAW YVHWVRSGLE AFERQLDLLA AEREAAGLAP SLFCWGDTPT LADCCLVPQI
FNGRRFNVSL DGLPRLAAIV DRCEALPAFQ KAHPSACPDA E