Gene Daci_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3548 
Symbol 
ID5749132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3897095 
End bp3897391 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content59% 
IMG OID641298649 
Producthypothetical protein 
Protein accessionYP_001564567 
Protein GI160898985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0288211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAGC TCTACGGCAT CAATCCCAAG ACCGTGGCCA AGTGGCGTGC GCGCACCTCG 
GTGCTCGACG AGCCCATGGG TCCTCGGGAC AGAGCAAGCC GGCATCTTTC TCAAGATGCA
AGAACATCTG GCAATTGCGT TACGCAAGCA AGGGCATTTG TCGCTGGACG ATCTCATGGG
ACAGCTCCTG GAGACAGCAC CCAAGCTCAG CCGCAGCGCC TTGCATCGAT GCCTGCAGCG
TCACGGAATC AGCCGACAAC CCGTAACGCA CCTGCCACGA AGGCACGGAA AGTTTGA
 
Protein sequence
MAKLYGINPK TVAKWRARTS VLDEPMGPRD RASRHLSQDA RTSGNCVTQA RAFVAGRSHG 
TAPGDSTQAQ PQRLASMPAA SRNQPTTRNA PATKARKV