Gene Daci_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3373 
Symbol 
ID5748958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3705625 
End bp3707361 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content69% 
IMG OID641298477 
Productmulticopper oxidase type 2 
Protein accessionYP_001564396 
Protein GI160898814 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.124514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCC CGGGCCTGAA CCGCAGGGCG CTGCTGCAAT GGGGCGCCCT GCTGACGGCG 
GGCGCCGTGC TGCCCGGCTG CGGCGGTGGA GGCGGGCCGC GCGACGATCT GCCCGAGCCG
CAGGCGCTGC GCTCCGTCAA CGGCGTGCTG GAGCTGCACC TGAACGTGGG CTATGCGTCC
ATGGACATGG ACCTGCCGGA CAGCGACATT GCGCGCTGGG CCCGCTATCC GGCCGATCGG
CAGCCCGGGC GGCGTCTGGA GCTGCGCAGC TTCAATGGGC GATACACGGC GCCCACGCTG
TGGCTGCGCC CCGGCGACAC GCTGAAGATG TGGGTGCACA ACCAGCTGCC GGCCTCGCCC
CAGGGCTCGG ACTGGGCGCT GCTCAACCAC CAGAACAGCA CCAACATGCA TTTCCACGGC
CTGCACGTGG ACCCGCGCGA GATACGGCCC GGCGTGTTTG GCGACTACGT GGTGGACGGG
CCGGATGCCG GCATCGCGCC CGGCGCCACG CGCTACCACG AGATCCATCT GCCCGACGAC
CACAGTTGCG GCATCTACTG GTACCACCCG CATCTGCACG GCGCCACCAA TGCCCAGGTC
TCCAGCGGCA TGTTCGGCGC CATCATCGTG GCCGATGCGC AGGACCCGTT CCGTGCCAGC
GTGAACATGC GCGAGCGCGT GCTGTTCGCC CACAAGCTCA CCGTCAACGC CAAGGGCCGC
ACCGATACGC TGGAAGACTC GATGCAGAAT CCGGCCGGCG CCTTTTTGCT CAACGGCGCC
TACCAGCCCA CCATCGTGAT GCGGCCCGGC GAGGTGCAGC ATTGGCACAT CGTCAATCCT
TCGTCGTTCT ACCCGCTGCA TCCCGTGCTC GACGGGCATG TGATGAATGT CTATGGCCGC
GACGGCAACC ATTACGGCGG CATCTACCGG CCGCTGAGCC GGCAGACGGC CGGGCAGCCG
CTGGACATGC GCGACTGGCC CGGCAACTAC ATCTACCCGG GCGGGCGCCT GTCCATGGTG
GTGCAGGCAT CGATGGCGCC GGGCGAGTAT TTCCTGCGCG CGGCCGCGTG CCCGTCCTTT
CACCGGCCAA GCGGCAACGA GCCCTTCGAG GAGGTGCTGG CCCGGGTGGT GGTGCAGGGC
GAGCCCGTGC AGGCCCGCGT GCCCGACCCG GCCCTGCTGC GCCGGCCCGG CGACTACACG
CCCATCACCG ATGCCGAGCT GGCCAGCCAT GGTGGCGTGC AGCGCGTCCT GCGCCTGGCC
GTGCTGGCCG ACGACGAGGA CAAGGGCGTG CGCGACCCGG CCCTGGCGCC CATGCCGGCC
GGCGAGAGCT GGGTGCTGAA GGTGGGCGGC AACCGATCGG TGTTTGCGGT GGGCACCGAG
GCCATGTCGC TGGGCATGTC GCCCATCCAT TCCAGCCTCA CGCCTGTGCA GACCGTGCCT
TTCAATGCGG TGGAGGAGTG GACGGTCTAC AACTACAACG GCTACCCGCA TCCCTTTCAC
ATCCACGTCA ACGATTGCTA TGTGGTCAGG GTCAACGGCG CGCCGGTGAC GCCGTTCTGG
GCCGACACCC TGCCCGTGCC GCCGGGCACG GGCGGCAGCG GGGCGGCGGG GGTCACCAAG
GGCAGCATCA CCTTTCGCAT GCGGTTCGCG GATTTCCACG GCAAGTTCGT CTGGCATTGC
CATGCGCTGG ACCATGAGGA CCTGGGAATG ATGCAGATCG TGGATGTGCG GCCCTGA
 
Protein sequence
MPAPGLNRRA LLQWGALLTA GAVLPGCGGG GGPRDDLPEP QALRSVNGVL ELHLNVGYAS 
MDMDLPDSDI ARWARYPADR QPGRRLELRS FNGRYTAPTL WLRPGDTLKM WVHNQLPASP
QGSDWALLNH QNSTNMHFHG LHVDPREIRP GVFGDYVVDG PDAGIAPGAT RYHEIHLPDD
HSCGIYWYHP HLHGATNAQV SSGMFGAIIV ADAQDPFRAS VNMRERVLFA HKLTVNAKGR
TDTLEDSMQN PAGAFLLNGA YQPTIVMRPG EVQHWHIVNP SSFYPLHPVL DGHVMNVYGR
DGNHYGGIYR PLSRQTAGQP LDMRDWPGNY IYPGGRLSMV VQASMAPGEY FLRAAACPSF
HRPSGNEPFE EVLARVVVQG EPVQARVPDP ALLRRPGDYT PITDAELASH GGVQRVLRLA
VLADDEDKGV RDPALAPMPA GESWVLKVGG NRSVFAVGTE AMSLGMSPIH SSLTPVQTVP
FNAVEEWTVY NYNGYPHPFH IHVNDCYVVR VNGAPVTPFW ADTLPVPPGT GGSGAAGVTK
GSITFRMRFA DFHGKFVWHC HALDHEDLGM MQIVDVRP