Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3371 |
Symbol | |
ID | 5748956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3703064 |
End bp | 3704188 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641298475 |
Product | hypothetical protein |
Protein accession | YP_001564394 |
Protein GI | 160898812 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.241512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.96149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCCAGC CCATGCAAGA CGATCTGTTT GGCGCGCCGC CCTCACCGCC GCCCTCCCCA CCCTCTTCCG CTCCGGCCTC GCCTGCCGCC AGCGCTGCGC CTGGCGGCCG CAAGCCGGCA TCCCGCAAGG CCGTCGGCGC CGTGCAGCTG GCGCCCCAGG CCCTGCAATG GCAGGCGCTG GCGGACCGGC TTCCGCAGGG CTTGCGCATG GGGGTCTCCA CCTGGTCCTA CCCGGGCTGG GAAGGTTTGA TCTGGGATGG CGCCTATGAC AAAAGCGTGC TCGCCAAGAA GGGACTGGAG GCCTATGGCC GGCATCCGCT GATGCGAACG GTCTGCGTGG ACCGCAGCTT CTGGAGGCCG TTGACGGCCA GCCAGTACCT GGCCTTCGCG GGCCAGGTGC CGGCCGATTT CCGCTTCGTG GTCAAGTGCC CTTCGGTGGT CACCGATGCG CAGGTCCGCG ACGAGGATGG CAAGGGCATG TCGCTGAACC CCGTATTCCT TCAACCCGAT CTGGCCGTGA CCAGCTTCGT CGAGCCCACG CTCGAAGGGC TGGGCGAGCA GCTCGGCGTG CTGGTGTTCC AGCTCAGTCC GATGACCTGG GGCCTGCTGA GCCGTCCCAC CGAACTGCTG GCGCGGCTGC AGGCCATGCT GGACGCGGTG CGAGCGGCGC TGGCCGCCCA TCCGCTGGGC GCACAGATCA TCGTGGCGGT GGAAGTGCGC GACCCGGAGC TTTTGACGCC CGAGCTGGCG GACACGCTGC TCGCTGCGGG CGCCACCTTC TGCCTGGGGC TGCACGGCAA GATGCCGCCC ATCGAAGAGC AACTGGTTTT TCTGCGGCGG CTGTGGCCCA GCCCCCTGGT CTGCCGCTGG AACCTGAACC GCGAGTTCGG GGCCTACGGC TACCCCGATG CGCAAACCAA GCACGACCCC TTCAACGAGA TCCGCACGCC CGATGTGCAC ACGCGCGCCA TCCTCGCCAA GACCATCGAT GGCATCACCA GCCGCGGGCT GCCCGCCTTT GTGACGGTGA GCAACGATGC CGAAGGCTGC GCGCCGCGCT CCATCGCGCT GCTGGCCGAG GCCGTGGTGC AAGCGCAGGC GGCCCGGATT CAGCGCTTGC CGTAG
|
Protein sequence | MLQPMQDDLF GAPPSPPPSP PSSAPASPAA SAAPGGRKPA SRKAVGAVQL APQALQWQAL ADRLPQGLRM GVSTWSYPGW EGLIWDGAYD KSVLAKKGLE AYGRHPLMRT VCVDRSFWRP LTASQYLAFA GQVPADFRFV VKCPSVVTDA QVRDEDGKGM SLNPVFLQPD LAVTSFVEPT LEGLGEQLGV LVFQLSPMTW GLLSRPTELL ARLQAMLDAV RAALAAHPLG AQIIVAVEVR DPELLTPELA DTLLAAGATF CLGLHGKMPP IEEQLVFLRR LWPSPLVCRW NLNREFGAYG YPDAQTKHDP FNEIRTPDVH TRAILAKTID GITSRGLPAF VTVSNDAEGC APRSIALLAE AVVQAQAARI QRLP
|
| |