| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3371 |
|---|
| Symbol | |
|---|
| ID | 5748956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3703064 |
|---|
| End bp | 3704188 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298475 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564394 |
|---|
| Protein GI | 160898812 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1801] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.241512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.96149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGC CCATGCAAGA CGATCTGTTT GGCGCGCCGC CCTCACCGCC GCCCTCCCCA
CCCTCTTCCG CTCCGGCCTC GCCTGCCGCC AGCGCTGCGC CTGGCGGCCG CAAGCCGGCA
TCCCGCAAGG CCGTCGGCGC CGTGCAGCTG GCGCCCCAGG CCCTGCAATG GCAGGCGCTG
GCGGACCGGC TTCCGCAGGG CTTGCGCATG GGGGTCTCCA CCTGGTCCTA CCCGGGCTGG
GAAGGTTTGA TCTGGGATGG CGCCTATGAC AAAAGCGTGC TCGCCAAGAA GGGACTGGAG
GCCTATGGCC GGCATCCGCT GATGCGAACG GTCTGCGTGG ACCGCAGCTT CTGGAGGCCG
TTGACGGCCA GCCAGTACCT GGCCTTCGCG GGCCAGGTGC CGGCCGATTT CCGCTTCGTG
GTCAAGTGCC CTTCGGTGGT CACCGATGCG CAGGTCCGCG ACGAGGATGG CAAGGGCATG
TCGCTGAACC CCGTATTCCT TCAACCCGAT CTGGCCGTGA CCAGCTTCGT CGAGCCCACG
CTCGAAGGGC TGGGCGAGCA GCTCGGCGTG CTGGTGTTCC AGCTCAGTCC GATGACCTGG
GGCCTGCTGA GCCGTCCCAC CGAACTGCTG GCGCGGCTGC AGGCCATGCT GGACGCGGTG
CGAGCGGCGC TGGCCGCCCA TCCGCTGGGC GCACAGATCA TCGTGGCGGT GGAAGTGCGC
GACCCGGAGC TTTTGACGCC CGAGCTGGCG GACACGCTGC TCGCTGCGGG CGCCACCTTC
TGCCTGGGGC TGCACGGCAA GATGCCGCCC ATCGAAGAGC AACTGGTTTT TCTGCGGCGG
CTGTGGCCCA GCCCCCTGGT CTGCCGCTGG AACCTGAACC GCGAGTTCGG GGCCTACGGC
TACCCCGATG CGCAAACCAA GCACGACCCC TTCAACGAGA TCCGCACGCC CGATGTGCAC
ACGCGCGCCA TCCTCGCCAA GACCATCGAT GGCATCACCA GCCGCGGGCT GCCCGCCTTT
GTGACGGTGA GCAACGATGC CGAAGGCTGC GCGCCGCGCT CCATCGCGCT GCTGGCCGAG
GCCGTGGTGC AAGCGCAGGC GGCCCGGATT CAGCGCTTGC CGTAG
|
|---|
| Protein sequence | MLQPMQDDLF GAPPSPPPSP PSSAPASPAA SAAPGGRKPA SRKAVGAVQL APQALQWQAL
ADRLPQGLRM GVSTWSYPGW EGLIWDGAYD KSVLAKKGLE AYGRHPLMRT VCVDRSFWRP
LTASQYLAFA GQVPADFRFV VKCPSVVTDA QVRDEDGKGM SLNPVFLQPD LAVTSFVEPT
LEGLGEQLGV LVFQLSPMTW GLLSRPTELL ARLQAMLDAV RAALAAHPLG AQIIVAVEVR
DPELLTPELA DTLLAAGATF CLGLHGKMPP IEEQLVFLRR LWPSPLVCRW NLNREFGAYG
YPDAQTKHDP FNEIRTPDVH TRAILAKTID GITSRGLPAF VTVSNDAEGC APRSIALLAE
AVVQAQAARI QRLP
|
|---|
| |