| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3354 |
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| Symbol | |
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| ID | 5748939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3683369 |
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| End bp | 3684547 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298458 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001564377 |
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| Protein GI | 160898795 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.385927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.681411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATGTCCG TCATGCAACA GCCGCCTCCC GCCCCACTGC CCTCCAACCC CTTCTATGCC
ACGCGGCAGG ACCGGGTGGC GCTGGCGCGC GAGCGCTATT TCGAGCGTGG CGAGCGCCCC
TCGGGTCTGG TGTCCGAGCC CGTGCTGCAG TCCTGGACGC GCTGCCTGGG CGCCAGCCGC
AGCCCCGACG AGAAGATCAG CTTCGACCCG GTCAGCAAGA TCCGCACGGC CACCTTGCTG
ACCCACAACC GCGCGCTGAT CGAGGCGGTG CGCGACCCCA TCGCCGAACT CGAGACCGTG
ATCGCGGGCA GCCAGGCGCG CGCCATGCTC ACCTGCAGCG AGGGCGTGGT GCTGATCGCC
TCGCGCCCCA CGCCGGGCGA CGGCCCGCTG CTGCTGACGG CTGCGCGCGT GGGCGTGAAC
ATCGCCGAGG ATGCCGTGGG CACGGGCGCA CCCGGCGTGG CCGTGCGCAC GGGCGAGGTC
TGCCATGTGC GTGGCGGCGA GCATTTCTTT CGCTGCCTGG CCTCGCTGCA CTGCGCGGCC
GCGCCCGTGC GCGACGCCAG CGGGCGCACC GTGGCCATGC TGGACCTGAG CAGCGAGGCG
GGCCCCTTTC GCTTCGATGC GGGCGCCATG GCCCACATGT ACGCCACCTG CATCGAGAAC
CGGCTGCTGG TGGGCGCCGC CCGCATGCAC CTGCTGCTGC GCTTTCAGTC CAGCCGCAGC
ATGTTCGGCA CGCCGCTGGA AGGGCTGGCC GCCGTGGATG GCGAAGGCAT GGTGCGCTGG
TTCAACGGCG TGGGCGCCCA GTTGTTCGAC AGCCCGCGCC GGCCCGCCGA GGGACTGGCG
GCAGAGGAAG TCTTCGGCCT GGGCCTGAAC CAGTTGCTGG AGCTGGCCCA CCACGGCCAG
GCGCGCCCGC AGATGCTGCC CACGGGGCTG ACGCTGTGGA TGGAGGCGAG GCTGGATGAG
GCATCCTCCC AGATTGAGGA GGTGCTGCCG GCCATCGAGG CCCTGCCGCC GCCCGCCGAG
GCGCCGTCCG AGGCACCGTC CTCCCTGGGC GAGGCCAGCC GCGAGCTGAT CGAGCAGGCC
CTGGCCCGCT GCCAGGGCAA TATCTCGCAG GCCGCCCGCA TGCTGGGCGT CTCGCGCGGG
CTGCTGTACC GGCGCCTGCG GGAGTGGGGC AGGGCCTAG
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| Protein sequence | MMSVMQQPPP APLPSNPFYA TRQDRVALAR ERYFERGERP SGLVSEPVLQ SWTRCLGASR
SPDEKISFDP VSKIRTATLL THNRALIEAV RDPIAELETV IAGSQARAML TCSEGVVLIA
SRPTPGDGPL LLTAARVGVN IAEDAVGTGA PGVAVRTGEV CHVRGGEHFF RCLASLHCAA
APVRDASGRT VAMLDLSSEA GPFRFDAGAM AHMYATCIEN RLLVGAARMH LLLRFQSSRS
MFGTPLEGLA AVDGEGMVRW FNGVGAQLFD SPRRPAEGLA AEEVFGLGLN QLLELAHHGQ
ARPQMLPTGL TLWMEARLDE ASSQIEEVLP AIEALPPPAE APSEAPSSLG EASRELIEQA
LARCQGNISQ AARMLGVSRG LLYRRLREWG RA
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