Gene Daci_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3334 
Symbol 
ID5748919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3657765 
End bp3658712 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content69% 
IMG OID641298438 
Producthypothetical protein 
Protein accessionYP_001564357 
Protein GI160898775 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.298058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACA GCCCCAGCCT CACCTCTGCA ACCTCACCCA CACGGCCCCG AACCAGCCAG 
GGCGGCACCT GGCGCATGCT GCTGGCCATG GCGCTGTCGG GCACCATCGG CCTGCTCGTC
GTGGAAAGCG CGCTGCCGCC GCTGCTGGTC GTATTCGCCC GCTGCGTGCT GGGCGCACTG
GGCCTGGGCC TGTGGCTGGC TTGGCGGCGC GAATGGGTCG CCCCTCAAGG CCGGGAATGG
CTGTGGCTGG CCGGGGGCGG CATCGCCCTG GTATTGAACT GGGTCGCCCT CTTCAGCGCC
TACCACTACA GCTCCATCGC CGTGGCCACC GTGGTCTATC ACGTGCAGCC CTTCATGCTG
CTGGCCCTGT CGGCGCTGCA GGGCGAGCCC GTCGAACGCC GCAAGCTGCC CTGGCTGCTG
CTGGCCCTGC TGGGGGTGGC ACTGAGCAGC GGCCTGGTCG GGCTGGACGG CATGGATGCA
TCGCATGCTG GAACAGGCGC ATGGGTCGGC GTGGCCCTGG CCCTGCTGGC CGCCGCTCTC
TACGCAGGCA CCACGGTCGC CACGCGCCGC CTGGGCCACA TGCCCTCGGC CCAGATCGCC
ATGCTGCAGA TGCTTGCGGG CGGACTGGTG CTGAGCCTGT GGGCCCTGCC GCTGCTCACC
CATATCGCCG CAGCCAGCCC ACAGTTGCTG TCAGCGCGGG CCGCCTCCAT GGTGCTGACC
CTGGGACTGG TCCATACGGC CTTCATGTAC ACGGTGATGT ATGCCGCATT CCAGCGGCTG
CCGGCGCCCG CCATTGCGGC ACTGTCTTTC GTCTACCCCG CCATGGCCTT GCTGGTGGAC
CTGGTCTGGT TTGGCGCTGT GCCGTCGGCG GCGCAGTGGG CGGGGATGGG CTTCATCCTC
GTCGCAGTCG TGGGTCATCG CGCAGGCATT GCATTGCGCC GCCATTGA
 
Protein sequence
MSHSPSLTSA TSPTRPRTSQ GGTWRMLLAM ALSGTIGLLV VESALPPLLV VFARCVLGAL 
GLGLWLAWRR EWVAPQGREW LWLAGGGIAL VLNWVALFSA YHYSSIAVAT VVYHVQPFML
LALSALQGEP VERRKLPWLL LALLGVALSS GLVGLDGMDA SHAGTGAWVG VALALLAAAL
YAGTTVATRR LGHMPSAQIA MLQMLAGGLV LSLWALPLLT HIAAASPQLL SARAASMVLT
LGLVHTAFMY TVMYAAFQRL PAPAIAALSF VYPAMALLVD LVWFGAVPSA AQWAGMGFIL
VAVVGHRAGI ALRRH