Gene Daci_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3257 
Symbol 
ID5748841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3564414 
End bp3565430 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content66% 
IMG OID641298360 
Producthypothetical protein 
Protein accessionYP_001564280 
Protein GI160898698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000268109 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGACA TCGTTACGCC AACCCCGATT GATGCGCTGC CGCCGGCGCC TTCTCCGGGC 
GATACGGCGG CTGAGTTCAA CGCCAAGAGC TTCCCGTTTG TCGCAGCGGA GGTGCTCATG
GTGCCGCAGA TCAACACTGC GGCGACCCAA ACCAACCAAA ACGCGGTCGC TGCCGACGAG
CGGGCAGTGG CCGCCGATGC GTCCAAAAGC GCAGCGCAGG CGGCGGCGGC CACGGCGACC
ACCAAGGCAG GAGAAGCAGT CGGCAGCGCA ACAGCAGCGG CTGGGAGCGC CACGGCCGCT
TCCACGTCGG CAGGCAACGC TGCAGGCTCG GCCACCGCCG CCTCAGGATC CGCATCGGCA
GCAGCAGGAA GCGCCACGGC CGCCTCCGGC TCGGCGACGG CTGCCAACAC GGCGAAGACA
GGCGCCGAGG CCGCCCGCGA TGCGGCTGAA GACTTCCGCG ACCAGGCCGA GGTCTTCGCG
ACCCAGCAGC TCAAGGGCAG CAGCACAACG AGCGTGACTC CTGGTGCCGG CGCCAAAAGC
TTCACGATCG AAGCATCGCG CTCGTTCGTG ACCGGCATGT ACGTCGTGGC CACGTCCACC
AGCGACCCTG CGACCCAGAT GAGCGGCCCT GTGCAGAGCT ACGACCCTGC TACGGGCGCG
CTGGTCATCG CTGTGGACAC ATTCAGCGGC GCTTCGGCGA AGTCCGATTG GGTCATCGGC
GTGGCCGCCA AGGGCTCCAG CGGCATGGCG CAGCAGGTCA TCACGGGCAA CACGACCGCC
GTGCCCGGGG TGATCTATGT GATCGCGGCT GCAAACGTGA CGCTTACGCT GCCGACGACC
GGCCTCAGCA GCGACAGCAA GATCGGGATC CGGCTTGCAG CCGCTGTATC GCGCAACCAG
GTCATTGACT TTCTGACGGT CAATTTCCGT GGCCAGACGC CTGGCCAACG ATTCATCGAC
AAGAAGGGCT TCGGCCTGGA CATCAAGTAC AACGCAACAC GAGGAGAGTG GGTATGA
 
Protein sequence
MTDIVTPTPI DALPPAPSPG DTAAEFNAKS FPFVAAEVLM VPQINTAATQ TNQNAVAADE 
RAVAADASKS AAQAAAATAT TKAGEAVGSA TAAAGSATAA STSAGNAAGS ATAASGSASA
AAGSATAASG SATAANTAKT GAEAARDAAE DFRDQAEVFA TQQLKGSSTT SVTPGAGAKS
FTIEASRSFV TGMYVVATST SDPATQMSGP VQSYDPATGA LVIAVDTFSG ASAKSDWVIG
VAAKGSSGMA QQVITGNTTA VPGVIYVIAA ANVTLTLPTT GLSSDSKIGI RLAAAVSRNQ
VIDFLTVNFR GQTPGQRFID KKGFGLDIKY NATRGEWV