Gene Daci_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3219 
Symbol 
ID5748803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3534653 
End bp3535453 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content61% 
IMG OID641298322 
Producthypothetical protein 
Protein accessionYP_001564242 
Protein GI160898660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.242742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.443173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGGT CTCGAAACAT CAAACCCGGC TTCTTCACGA ACGAAGACCT CGTGGAACTC 
AACTTCGGCA CGCGTCTGCT GTTCGCTGGC CTGTGGACTC TGGCCGACCG CGAAGGCCGC
CTTGAGGACC GTCCGAAGAA GATCAAGATC GGAGTCTTTC CGGCTGACAA CGTCGATGTT
GACGCCATGC TCCAGGAGCT GCACGAGGCA AAGTTCGTTG TGCGCTACGA GGTTGACGGT
TCGCGCTACG TGCAAATAGC CAACTGGAGC AAGCACCAAA ACCCGCACCA CACCGAGAAG
GCCTCGGAGA TTCCTGGCAT AGAAGGTGCC GTAACGGTTA AGGACGGAGA CAAGGCCGGT
GGAAATCCTG CTGATTCTCT GATTCCTGAT TCCCTCTCTT CTGATTCCTT GAAACCGGCG
GACAAGCCCG CCACGACGGC CAAGCCGTCT CGCCCCTCTG CCGGACTGAA GACCCTGAAG
ACCTACCTGG CCGAGTGCGA GGAGCAGGGC GTGAAGCCGG TGCCTGATGA CCATGCGATC
CGCACGTTCA TGGCCAAGGC TGGGATCTGC GACGAGATGC AGCAGCTGGC CTGGATGCGG
TTCCGTGAGG AGCACACGAC TGGCACGCGC AAGGACAAGC GCCAGAAGGA CTGGCCGGCG
ACGTTCGCCA ACTCGGTGAA GGACCGCTGG TACAGGCTCT GGTTCATCCA GGCCAACGGG
CCTGCGCAGT GGACCACCGA AGGCCTGCAG GCCAAGCGCG TGGCGGACGC TGCCAACGAA
GACCAGCAGG AGGCAGCATG A
 
Protein sequence
MARSRNIKPG FFTNEDLVEL NFGTRLLFAG LWTLADREGR LEDRPKKIKI GVFPADNVDV 
DAMLQELHEA KFVVRYEVDG SRYVQIANWS KHQNPHHTEK ASEIPGIEGA VTVKDGDKAG
GNPADSLIPD SLSSDSLKPA DKPATTAKPS RPSAGLKTLK TYLAECEEQG VKPVPDDHAI
RTFMAKAGIC DEMQQLAWMR FREEHTTGTR KDKRQKDWPA TFANSVKDRW YRLWFIQANG
PAQWTTEGLQ AKRVADAANE DQQEAA