Gene Daci_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3201 
Symbol 
ID5748785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3520743 
End bp3521243 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content58% 
IMG OID641298304 
Productpathogenesis-related transcriptional factor and ERF protein 
Protein accessionYP_001564224 
Protein GI160898642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.295618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGTCG AGCTCAAGAC TACCTGCGGT ACGCCATTCA TGGTTGACGA AGACATTGCG 
GCGCGAGTTC GCCACCTCGC CTGGAAGCTC GATAAGGACG GCTACGTGAT CCGCAAGACA
ACCATCAGCG GGAAGCGGGG CCGGACAGTT CGCCTGCACC GCATCGTAGC GGGCTGCAAC
GACAGCAGCG TGCTGATCGA CCATCGGAAC TGCGACAAGC TCGACAACAC CCGAGCCAAT
CTGCGCGAGG CCACGAAGCG GAACAACAGC CACAACTCCA TGAAGTCTCC TGGCTGTTCA
TCAGTTTTCC GTGGAGTCAC ATGGAACCGA AGTTCCTCAA AGTGGCAAGC CAGCATCAAG
GTGGGCGGCC GATATCTCTA CCTTGGCGTT TTCAAGGAAG AGCACGAGGC CGGTCATGCA
TACAACCGGG CGGCAGTAGT CCATCACGGC GAGTTCGCGC GCCTAAATCC GATTGGCTTC
AAACTGGGAG GTGAGGTATG A
 
Protein sequence
MMVELKTTCG TPFMVDEDIA ARVRHLAWKL DKDGYVIRKT TISGKRGRTV RLHRIVAGCN 
DSSVLIDHRN CDKLDNTRAN LREATKRNNS HNSMKSPGCS SVFRGVTWNR SSSKWQASIK
VGGRYLYLGV FKEEHEAGHA YNRAAVVHHG EFARLNPIGF KLGGEV