Gene Daci_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3156 
Symbol 
ID5748740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3472567 
End bp3473904 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content50% 
IMG OID641298259 
Producthypothetical protein 
Protein accessionYP_001564179 
Protein GI160898597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000294118 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000017357 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAATG ATGATCTATA CTCATTTTTT TCCGACCCTG AACTGATCGA GTTAATCGAG 
CAGGCAAAGA TTTCAGATGA TATCCTAGAT GTCATAACAC TGAATGAAAA TCAGCATTCA
GATATGCTAG CTTGGTGCTT GACACCAGGG GAAGGACATG GTCAAGGGGA CTCCGTCATT
AAAGATTTTC TAGAAGCCGC ATACCAAAAA TCAGATGCAG CTATCTACGA TAATAAAAAG
TTCTTTCGCA AATGGACACC GGGACGTATT CGTGTGTCGA GTTTTGGCTC AGCTTTCGTT
ACGCGGGAAT TTGTGGTGAG TGTAAAAGAA CCCGGGCAAG AAGAAAAGCG TACCGGACGA
CTCGATCTTT TTATAGTAGA TCCTCAGAAC AAGCTACTGA TTGCAATCGA AAACAAAGTT
GGTGCGAGAC TGACCGAAGA GCAACTGGCT CGCTACCAAG GAGCAATAAA TAAAGAAATT
GGCAGTCGCC CTATATTCAA AGACTATGAA TTCGCTTACG TCGTGCTGGA TCGTGAACTT
GATTGGTACA CAGATGACAA ACTAAACGCG CTCGGCAAGC GCTGGGCACT GCTCGACTAT
TCATGGCTTG AAGCATCGGC CCGTCGGGCG CGATTGCAAG TTACCCGCAA CAACCAAGCC
GCACAACTGC TGGTTGCCTA TTGCCAAAAA CAGACTAGCT GGGAGAGTTC GTCGGAAGCA
CGGCTGTCTG AACTAGCTGG TGAAATTGCC AGCAAGCACC CACAGGTGAT TGCCGCGCTG
AGTGCTTTGC GCGGCCAGAG TATCGCTCAG TGGACGCCAA AGACGCTTGA AGGCCTAAGC
GGCGAGCTGG CTCTTTTCCG TGCGCAGCAC TTGCGGCTGT GCATGTTACT AACACGTAGC
CAGGGCATTG CATCGTTACA ACGAAAAATC CGCAAGGCCT TACCCCTCAG TGACATGGTA
AACGGGCGAA CTTGGCTAGA ATTTGCCACG CCAGACATAG CCGAACTAAC CATCGACGAT
GAAAGCTCCT GGGCGCTATC TGTAAATATC CGTCGGCAGC CAAATAATGA CGACAACAAG
CCACGCTACA CGTTGCGAGC AATGTGGAGG CGCGCCTCTT TCGACGATGC CCATGGAAAC
GAAACCGACC TCCGTCGCCA CTTTGAAGCA GTATTGCCCG GGCTCAAGCA CTTCAGTTCT
GCAACAGAGC GTCGAATGGT GATTGCGCAA AGTCTGGATG CAGACGCGGT ATTGCAACGA
GCAGTTAAGC TAGCGCAGCA GTTGTCGGCT TCCTTGTTAA ATTTGAGCAT GGCCACCCCC
ATGCGAAAAA TATCATAG
 
Protein sequence
MNNDDLYSFF SDPELIELIE QAKISDDILD VITLNENQHS DMLAWCLTPG EGHGQGDSVI 
KDFLEAAYQK SDAAIYDNKK FFRKWTPGRI RVSSFGSAFV TREFVVSVKE PGQEEKRTGR
LDLFIVDPQN KLLIAIENKV GARLTEEQLA RYQGAINKEI GSRPIFKDYE FAYVVLDREL
DWYTDDKLNA LGKRWALLDY SWLEASARRA RLQVTRNNQA AQLLVAYCQK QTSWESSSEA
RLSELAGEIA SKHPQVIAAL SALRGQSIAQ WTPKTLEGLS GELALFRAQH LRLCMLLTRS
QGIASLQRKI RKALPLSDMV NGRTWLEFAT PDIAELTIDD ESSWALSVNI RRQPNNDDNK
PRYTLRAMWR RASFDDAHGN ETDLRRHFEA VLPGLKHFSS ATERRMVIAQ SLDADAVLQR
AVKLAQQLSA SLLNLSMATP MRKIS