Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3138 |
Symbol | |
ID | 5748722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3454786 |
End bp | 3455964 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641298241 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001564161 |
Protein GI | 160898579 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0152397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCCT TACCTTCCCA CGAGCACACC TGTATGGCCA CCGACCCCCT GCTGCCGCTG TCCGGCATCC GCGTCATCGA ATTCACCCAC ATGGTCATGG GCCCCACCTG CGGCATGATC CTGGCCGACC TGGGCGCCGA AGTCATCAAG GTCGAGCCAC CGGGCGGAGA CAAAACGCGC ACGCTGCCTG GCCTGGGCAT CGGCTTTTTC CGCAGCTTCA ACCGCAACAA GAAAAGCGTG GTGCTGGACA TCACCACCGA AGCGGGCCGC GCCACCGCTG CCGAACTGGC CGCTGGCAGC GACGTGGTGC TGGAGAACTT CCGCCCCGGC CTCATGCAGT CCCTGGGCCT GGACCACGCC ACGCTGTCGC AGCGCGCGCC CGGTCTCATC TACGTCAGCC ACAAGGGCTT TCTGCCCGGC CCCTACGAGA AGCGCCTGGC GCTGGACGAG GTGGTGCAGA TGATGGGCGG CCTGTCGTAC ATGACCGGCC CCGTGGGCCG GCCGCTGCGC GCGGGCACCA GCGTCAACGA CATCATGGGC GGCATGTTCG GCGCCATCGG CGTGCTCGCC GCCCTGCGCG AGCGTGAGCG CACCGGGCGC GGCCAGGAGG TGCAAAGCGC GCTGTTCGAG AACTGCGTCT TCCTGTCCTC CCAGCACATG CAGCAGTACC TGATGACGGG CGAGGCACCG CCGCCCATGC CCTCGCGCGT ATCGGCCTGG AGCGTCTACG ACGTGTTCAC CCTGGCCGGT GGCGAGCAGC TGTTCATCGG CGCCGTCAGC GACAAGCAGT TCGCCACCCT GTGCCGCGTG CTGGACTGCG CCGACCTGCT GCAGCGCCCC GAATACGCCG ACAACGCCGC CCGCGTGGCC GTGCGCCCCC AACTGCTGGC CGAGCTGGGC GCCATCCTGG CCAGCCATGA ATCGGCCCGG CTCGCGCCGC AGCTGGAGGC CGCAGGCATT CCCTACGCGC CCATCACTCG GCCTGAGCAA CTGGTGGACG ACCCGCACCT GCGCCAAAGC GGCGGCCTGG CTTCCATGCA GACCGAAGAC GGCGGCCAGA CCGACGTGGT GCTGCTGCCC CTGCTCATGA ACGGCCACCG TCCCGGCGTG CGCATGCCGC TGGCCGGGAT TGGCGAGCAC ACCGAAGAAA TCCTCGGAGC CCTTGCATCA CGGACCTGA
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Protein sequence | MNPLPSHEHT CMATDPLLPL SGIRVIEFTH MVMGPTCGMI LADLGAEVIK VEPPGGDKTR TLPGLGIGFF RSFNRNKKSV VLDITTEAGR ATAAELAAGS DVVLENFRPG LMQSLGLDHA TLSQRAPGLI YVSHKGFLPG PYEKRLALDE VVQMMGGLSY MTGPVGRPLR AGTSVNDIMG GMFGAIGVLA ALRERERTGR GQEVQSALFE NCVFLSSQHM QQYLMTGEAP PPMPSRVSAW SVYDVFTLAG GEQLFIGAVS DKQFATLCRV LDCADLLQRP EYADNAARVA VRPQLLAELG AILASHESAR LAPQLEAAGI PYAPITRPEQ LVDDPHLRQS GGLASMQTED GGQTDVVLLP LLMNGHRPGV RMPLAGIGEH TEEILGALAS RT
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