| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3054 |
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| Symbol | |
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| ID | 5748638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3359838 |
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| End bp | 3362936 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298157 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001564077 |
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| Protein GI | 160898495 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.267975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCCG CCATGCTGAT GGAATCCACG CACCGCCTTG CCGCTTCCCC CGACGACACC
GTGCCCGCCC CCGGCACCGT GCTGCCGCCC GACGATGTCA GCCAGATGCT GGCGCGCCGC
CTGCGCTCGG ACACGCGCGG CCAGGTCCTG TTCGACGCCG CCTCGCGCGG GCGCTATGCC
ACCGATGCCT CCATCTACCA GATCATGCCG GTGGGCGTCT TCGTGCCCAC CTGCGAAGAA
GACATCGCCA CGGCCCTGCA GATCGCCCGC GAGCTGAAGG TGCCCGTGCT GCCGCGCGGC
GGCGGCACCA GCCAGTGCGG GCAGACCACG GGCGCGGCCC TGGTGATCGA CAACAGCAAG
CATTTGCGCA ACATCCTCTC GGTGGACCCT GATGCAGGCA CGGCCGAGGT CGAGCCCGGC
CTGGTGCTGG ACCACCTCAA CGCCCGGCTC AAGAAGCTCG GCCTGTGGTA TCCGGTGGAC
GTATCGACCA GCGCCCAGGC CACGCTGGGC GGCATGGCGG GCAACAACTC CTGCGGCTCG
CGCTCCATTG CCTACGGCAA CATGGTGCAC AACGTGCGCG GCGCCCGCGC CTGGATGGCC
GATGGCGAGC TGCTGGACTT CGGCCCCGTC GCCCAGGCCA CGGGCCGCGC GGCGCGCATT
GCGCAATTCG TGCACGGGCT GGCGCAACAG CACCGGGCGG AAATCCACGC GCACTGGCCC
AAGGTCATGC GCCGCGTGGC GGGCTACAAC CTCGACATCT TCGACAACCA GAGCGAGCGG
CCCTACACGG CCGACGGCAG CGTCAACCTG GCCCATCTGC TGATAGGCGC CGAGGGCACG
CTGGCCTACA CGCGCTCGCT CACCCTGCAG CTCAGCGCGC TGCCGCGCGC CAAGGTGCTG
GGCGTGGTCA ACTTCCCCAC CTTCCACGCG GCCATGGACT CGGCCCAGCA CATCGTGAAG
CTGGGACCCA CGGCCGTGGA GCTGGTGGAC CGCACCATGA TCGAGCTGGG CCTGGCCAAC
CCGGCCTTCA AGCCCACCAT AGAAACCGCC CTCATCGGCC GCCCGGCTGC CATCTTGCTG
GTGGAATTCG CCGGCGACGA CCGTGCCGCG CTGCTGGCGC GGCTGCGCCA GCTGGTGGAG
CTGATGGGCG AGCTGGGCCT GCCCGGCAGC GTGGTGGAAA TGCCCGAGGA AGCGGCCCAG
AAAAACCTCT GGGAAGTGCG CAAGGCGGGG CTGAACATCA TGATGAGCCT CAAGGGCGAT
GGCAAGCCCG TGAGCTTCAT CGAGGACTGC GCCGTGCCGC TGCAGCACCT GGCCGAGTAC
ACCGACGCGC TCACCGAAGT GTTCGCGCGC CATGGCAGCC GGGGCACCTG GTACGCCCAT
GCCTCCGTGG GCACGCTGCA TGTGCGGCCC ATCCTGGACA TGCGCACCGA CGGCGCGGCG
CGCATGCGCG CCATTGCCGA GGAAGCTGCC GAACTGGTGC GCAAATACAA GGGCGCCTTC
AGCGGCGAGC ACGGCGACGG GCTGTGCCGC GGCGAGTGGA TTGCCTGGCA GTTCGGGCCC
GCCATCACCG AGGCCCTGCG CGCCATCAAG CAGCATTTCG ATCCGGACAG CCTCTTCAAC
CCCGGCAAGA TCATCGATAC GCCGAAGATG GACGATGGCC GGCTGTTCCG CTTCGCGCCC
GCCGATACGC CCCGGCCTTA CCGGCGCGTT CCCATCACGC CCGTGCTCGA CTGGTCGGCC
TGGAACGTGC AGGCCGACCC GGTCACCGAA ATCACCACGG CACCCGGCAC GGGCGGCGAC
GTCACCGGCG GCTTTGCCAA GGCCGTGGAG ATGTGCAACA ACAACGGCCA CTGCCGCAAG
TTCGACGCCG GCACCATGTG CCCCAGCTAC CGCGTCACGC GCGACGAGCA GCACCTGACG
CGCGGCCGCG CCAACACCCT GCGCCTGGCC ATCTCGGGCC AGCTGGGGCC GGATGCCTTC
ACCAGCGAGG CCCTGCACGA CACCATGGAC CTGTGCGTGG GCTGCAAGGG CTGCAGGCGC
GACTGCCCCA CGGGCGTGGA CATGGCCCGC ATGAAGGTGG AATTCCTGGC CCACTACAAG
GCCCGCCATG GCCACACGCT CAAGGACCGG CTGGTCGCCC ATCTGCCGCG CTACGCCGCC
ACGGCCAGCC GCATGCCCTG GCTGCTGAAC CTGCGCAACC GCCTGCCCGT GCTGCGCCAA
CTGGGCGAAA AACTGCTGGG CCTGTCCGCC AGGCGCTCGC TGCCGGCCTG GCGCAGCGAC
ACCTTCTGGC GCGCGCCCGA AGCACATACC TTTCTTGACC GCGACCAGGC CCTGGCCCGC
GCGGCGGCCG GCGAGCGCGT GGCCGTGCTC TTCGTGGACA CCTTCAACGG CACCTTCGAG
AGCGAAAACG CCCTGGCCGC CGCGCGCGTG CTGCAGGCGG CCGGCTATGC GCTGCACACC
GCCAGCAAGT CCGCCAAAGA GGGGGGCGGC CACCACTGCT GCGGCCGCAC CTACCTGGCC
ACCGGCATGG TCGAGCAGGC CAAGGCCAGC GCCGGTGCGC TGATCAACGC CCTGGCGCCC
CTGGCCCGGG CCGGCATCCC CATCGTCGGC CTGGAGCCCT CCTGCCTGCT GACCCTGCGC
GACGAAGCCC TGGTCATGGG CCTTGGCGAG CCTGCACAGG CCGTTGCCGC CCAGGCCCTG
CTGTTCGAGG AATTCATTGC CCGTGAAGTG AAGGCCGGCC GCTTCGCGCT GCCGCTGCGC
GCCGCCGAGG CGCCCATCCT CGTGCACGGC CATTGCCACC AGAAGGCCTT CGGCGCCGTC
AGCCCCATCC TCGACGTGCT GCGGCTGATT CCCGGCGCCC AGCCCGAGCT CATCGAAAGC
TCCTGCTGCG GCATGGCCGG CAGCTTCGGC TACGAGGCCA GCCACCACCA GGTCTCCATG
GACATGGCCG AGGCGGCCCT GCTGCCGGCC ATCCGCCAGC GCCCCGAGGC CATCGTCGTG
GCCGACGGCA CCAGCTGCCG CCACCAGATC GCCGACGGCG CGGCGCGCGA AGCCGTGCAT
GTGGCGCGGC TGCTGGAAAG CCTGCTGGAC GCCCGCTGA
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| Protein sequence | MRAAMLMEST HRLAASPDDT VPAPGTVLPP DDVSQMLARR LRSDTRGQVL FDAASRGRYA
TDASIYQIMP VGVFVPTCEE DIATALQIAR ELKVPVLPRG GGTSQCGQTT GAALVIDNSK
HLRNILSVDP DAGTAEVEPG LVLDHLNARL KKLGLWYPVD VSTSAQATLG GMAGNNSCGS
RSIAYGNMVH NVRGARAWMA DGELLDFGPV AQATGRAARI AQFVHGLAQQ HRAEIHAHWP
KVMRRVAGYN LDIFDNQSER PYTADGSVNL AHLLIGAEGT LAYTRSLTLQ LSALPRAKVL
GVVNFPTFHA AMDSAQHIVK LGPTAVELVD RTMIELGLAN PAFKPTIETA LIGRPAAILL
VEFAGDDRAA LLARLRQLVE LMGELGLPGS VVEMPEEAAQ KNLWEVRKAG LNIMMSLKGD
GKPVSFIEDC AVPLQHLAEY TDALTEVFAR HGSRGTWYAH ASVGTLHVRP ILDMRTDGAA
RMRAIAEEAA ELVRKYKGAF SGEHGDGLCR GEWIAWQFGP AITEALRAIK QHFDPDSLFN
PGKIIDTPKM DDGRLFRFAP ADTPRPYRRV PITPVLDWSA WNVQADPVTE ITTAPGTGGD
VTGGFAKAVE MCNNNGHCRK FDAGTMCPSY RVTRDEQHLT RGRANTLRLA ISGQLGPDAF
TSEALHDTMD LCVGCKGCRR DCPTGVDMAR MKVEFLAHYK ARHGHTLKDR LVAHLPRYAA
TASRMPWLLN LRNRLPVLRQ LGEKLLGLSA RRSLPAWRSD TFWRAPEAHT FLDRDQALAR
AAAGERVAVL FVDTFNGTFE SENALAAARV LQAAGYALHT ASKSAKEGGG HHCCGRTYLA
TGMVEQAKAS AGALINALAP LARAGIPIVG LEPSCLLTLR DEALVMGLGE PAQAVAAQAL
LFEEFIAREV KAGRFALPLR AAEAPILVHG HCHQKAFGAV SPILDVLRLI PGAQPELIES
SCCGMAGSFG YEASHHQVSM DMAEAALLPA IRQRPEAIVV ADGTSCRHQI ADGAAREAVH
VARLLESLLD AR
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