| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3037 |
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| Symbol | |
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| ID | 5748621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3341496 |
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| End bp | 3342236 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298140 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001564060 |
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| Protein GI | 160898478 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.470053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCG TGGCCGCTCC CGCGGACCTC TTCGATGCCG AGCACCAGGC CCTTTTGGCG
GCCCGCGCCG CCCACGACCG GGGCGAAGAA GCCGGCGCCC AGGCCTGCCA CCAGGCCCTG
GGCGTGCTGC TGACCGCCTA TGAGCGCCTG CTGCGCGAAA CGCGCCGGCT GGTACGCCGC
AGCGACCGGG CCGAGCTGGA GATGACCCAG CTCAACCAGC GCCTGCAGGA GCTGGCCGGC
GAGCTGGAAT ACCGCGCCAC GCACGACCCG CTGACCGGCG TGCTCAACCG CGCGGCCATC
ATCGAGCGCG TGAACCGCCA CTTCACCCAG CAGGGGCTGG CCCTGATCGT GCTGGACATA
GACCACTTCA AGCGCGTGAA CGACAGCTTC GGCCACCCCG TGGGCGACAG CGTGATCCTG
GGCGTGGTGC GCTGCCTCAA GGCCGCCGTG CCGGCCACGG CCCACATCGG CCGCGTGGGC
GGCGAGGAAT TCACCGTGCT GCTGCCCCAG CACGACAGCG ACGGCGCCGT GTGCGTGGCC
GAGCAGGTGC GCGCCGCCAT CGAGGCCCAT CCCTTCGGCC TGCCCGACGC CAGCTGCATC
ACGGCCAGCT TCGGCGTGAG CTGGCGCCCG AGCGGCGGCC GCTTCGACGA CGCCTACAGC
CTGGCCGACG AGGCGCTGTA CGCCGCCAAG CGCAGCGGGC GCAACCAGGT CGTGCGCGCG
GCAGACCATG CCACGGCCTG A
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| Protein sequence | MDTVAAPADL FDAEHQALLA ARAAHDRGEE AGAQACHQAL GVLLTAYERL LRETRRLVRR
SDRAELEMTQ LNQRLQELAG ELEYRATHDP LTGVLNRAAI IERVNRHFTQ QGLALIVLDI
DHFKRVNDSF GHPVGDSVIL GVVRCLKAAV PATAHIGRVG GEEFTVLLPQ HDSDGAVCVA
EQVRAAIEAH PFGLPDASCI TASFGVSWRP SGGRFDDAYS LADEALYAAK RSGRNQVVRA
ADHATA
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