Gene Daci_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2923 
Symbol 
ID5748505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3210161 
End bp3211489 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content66% 
IMG OID641298024 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001563946 
Protein GI160898364 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.306644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCG TCCCCACCCA CGCCGCCAGC CCCGAGCGGC TGCCTTTCTA CCGCCAGCTG 
TATTTCCAGG TGGTGGTCGC CATCGTGGCA GGCGTGCTGC TCGGCCACTT CGAGCCCCAG
TACGCCGAGC AGTTCAAGCC GCTGGGCGAT GCCTTCATCA AGCTGGTGAA GATGATCATC
GCGCCGGTGA TCTTCCTGAC CATCGTCACC GGCATTGCGG GCATGACGCA CCTGCGCACC
GTGGGCCGCG TGTTCCTCAA GGCCATGGCC TACTTCCTGT TCTTCTCCAC GCTGGCCCTG
GTGGTCGGCA TGGTGGTGGC GCACGTGGTG CAGCCGGGCG CAGGCATGAA CATCAACCCG
GCCGACCTGG ACCAGGCCGC CGTCAAGGGC TATGTGGCCA AGTCGCATGA GCTGACGCTC
ACCGGCTTTG CCATGGACAT CATCCCCAAG ACGCTGGTCA GCCCCTTCGT GGGCGACAAC
ATCCTGCAGG TGCTGTTCGT GGCCGTGCTG TTCGGCATCT CGCTGGCCAT GGTCGGTGAT
GCGGGCAAGC CCGTGCTGAA CTTCCTGGAG GCGCTGACGG CCCCCGTGTT CAAGCTGGTC
GGCATCCTGA TGAAGGCCGC GCCGCTGGGA GCCTTTGGCG CCATTGCCTT CACCATCGGC
AAGTTCGGCC TGGGTTCGCT GGTGAACCTG GCCTGGCTGG TGGGCTCGTT CTACATCACC
TCGCTGCTCT TCGTGGTGGT GGTGCTGGGC TTCGTGGCGC GGCTGTGCGG CTTCTCGGTG
CTCAAGCTGG CGCGCTACCT GAAGGCGGAA CTGCTGCTGG TGCTGGGCAC CTCGTCCTCG
GAATCGGCCC TGCCTTCGCT GATGCAGAAG ATGGAGCGCG CCGGCTGCGG CAAGTCCGTC
GTGGGCCTGG TCGTGCCCAC GGGCTATTCG TTCAACCTGG ACGGCACCAA CATCTACATG
ACGCTGGCCG CGCTGTTCAT CGCCCAGGCC ACCAACACCC ACCTGACCCT GGGCCATGAG
ATCGCGCTGC TGCTGGTGGC CATGCTCAGC TCCAAGGGCG CTGCCGGCGT GACCGGCGCG
GGCTTCATCA CCCTGGCCGC CACGCTGGCC GTGGTGCCCG AAGTGCCCGT TGCCGGCATG
GCCCTGATCC TGGGCGTGGA CCGCTTCATG AGCGAGTGCC GCTCGCTGAC CAACTTCATG
GGCAATGCCG TGGCCACCGT GGTGGTATCG CGCTGGGAAA ACGAGCTGGA CTACAGCAAG
CTCAACGCTG CCCTGGATGG AGAGCCTGTG CAGGCCCTGC CTGCCGAGGC CGCAGCCGTC
AAGGCCTGA
 
Protein sequence
MHAVPTHAAS PERLPFYRQL YFQVVVAIVA GVLLGHFEPQ YAEQFKPLGD AFIKLVKMII 
APVIFLTIVT GIAGMTHLRT VGRVFLKAMA YFLFFSTLAL VVGMVVAHVV QPGAGMNINP
ADLDQAAVKG YVAKSHELTL TGFAMDIIPK TLVSPFVGDN ILQVLFVAVL FGISLAMVGD
AGKPVLNFLE ALTAPVFKLV GILMKAAPLG AFGAIAFTIG KFGLGSLVNL AWLVGSFYIT
SLLFVVVVLG FVARLCGFSV LKLARYLKAE LLLVLGTSSS ESALPSLMQK MERAGCGKSV
VGLVVPTGYS FNLDGTNIYM TLAALFIAQA TNTHLTLGHE IALLLVAMLS SKGAAGVTGA
GFITLAATLA VVPEVPVAGM ALILGVDRFM SECRSLTNFM GNAVATVVVS RWENELDYSK
LNAALDGEPV QALPAEAAAV KA