Gene Daci_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2908 
Symbol 
ID5748490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3193960 
End bp3194508 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID641298009 
Producthypothetical protein 
Protein accessionYP_001563931 
Protein GI160898349 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.579881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0130755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CAATTCTTCC CCCCCTTCAG GAGCACCCCA TGAAACATGA ACGCATGGCA 
TCCGCCCACC CGCGCCGCAG TGCGCTGCGC CGCATGGCCC TGGCCTGCAC GGCATTCGCC
GCCCCTTCGC TGTGGGCGGC CGCACCCACG GCCCGCATCC CGGTCGAGGT CTGGAAGGAC
CCCAACTGCG GCTGCTGCCA GGACTGGGTG GTGCACATGG AGCAAAACGG CTTTGCCGTC
ACCGTGCACG ACACCGGCAA CAGCGCCGTG CGCGCCCGGC TGGGCATTCC GGCGCGCCTG
GGCTCCTGCC ACACGGCCCT GGTCGAAGGC TATGCGCTCG AAGGCCATGT GCCTGCGGCC
GACGTGCACA AGCTGCTCAG GCAAAAGCCC AAGGCGGTGG GCATTGCCGT GCCCGGCATG
CCCGTGGGCA GCCCCGGCAT GGACGGCCCC GAGTACGGCG ACCGCAAGGA CCCCTACGAG
GTGCTGCTGA TCACCAAGAA CCTCATGAAC AGCGACGTTT CCACCCGTAC CTTCACCAGC
TACCGCTGA
 
Protein sequence
MSAPILPPLQ EHPMKHERMA SAHPRRSALR RMALACTAFA APSLWAAAPT ARIPVEVWKD 
PNCGCCQDWV VHMEQNGFAV TVHDTGNSAV RARLGIPARL GSCHTALVEG YALEGHVPAA
DVHKLLRQKP KAVGIAVPGM PVGSPGMDGP EYGDRKDPYE VLLITKNLMN SDVSTRTFTS
YR