Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2908 |
Symbol | |
ID | 5748490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3193960 |
End bp | 3194508 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298009 |
Product | hypothetical protein |
Protein accession | YP_001563931 |
Protein GI | 160898349 |
COG category | [R] General function prediction only |
COG ID | [COG3019] Predicted metal-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.579881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0130755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGC CAATTCTTCC CCCCCTTCAG GAGCACCCCA TGAAACATGA ACGCATGGCA TCCGCCCACC CGCGCCGCAG TGCGCTGCGC CGCATGGCCC TGGCCTGCAC GGCATTCGCC GCCCCTTCGC TGTGGGCGGC CGCACCCACG GCCCGCATCC CGGTCGAGGT CTGGAAGGAC CCCAACTGCG GCTGCTGCCA GGACTGGGTG GTGCACATGG AGCAAAACGG CTTTGCCGTC ACCGTGCACG ACACCGGCAA CAGCGCCGTG CGCGCCCGGC TGGGCATTCC GGCGCGCCTG GGCTCCTGCC ACACGGCCCT GGTCGAAGGC TATGCGCTCG AAGGCCATGT GCCTGCGGCC GACGTGCACA AGCTGCTCAG GCAAAAGCCC AAGGCGGTGG GCATTGCCGT GCCCGGCATG CCCGTGGGCA GCCCCGGCAT GGACGGCCCC GAGTACGGCG ACCGCAAGGA CCCCTACGAG GTGCTGCTGA TCACCAAGAA CCTCATGAAC AGCGACGTTT CCACCCGTAC CTTCACCAGC TACCGCTGA
|
Protein sequence | MSAPILPPLQ EHPMKHERMA SAHPRRSALR RMALACTAFA APSLWAAAPT ARIPVEVWKD PNCGCCQDWV VHMEQNGFAV TVHDTGNSAV RARLGIPARL GSCHTALVEG YALEGHVPAA DVHKLLRQKP KAVGIAVPGM PVGSPGMDGP EYGDRKDPYE VLLITKNLMN SDVSTRTFTS YR
|
| |