| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2887 |
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| Symbol | |
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| ID | 5748468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3169105 |
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| End bp | 3169794 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641297987 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001563910 |
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| Protein GI | 160898328 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.597851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.757652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCACAC CCCAAACCAT CGCCAACTTC AACGGCACCC GCCCGGTCAT CGATCCCGAC
AATGTGGCGA TGCTGCTGAT CGACCATCAA AGCGGCCTGT TCCAGACCAT CAAGGACATG
CCCTTCACCG AGGTGCGTGC CAATGCCACC ACACTCGCCA AGGTAGCGAC ACTGGCGAAG
ATCCCGGTCA TCACCACCGC ATCGGTGCCG CAGGGTCCGA ACGGCCCCTT GATCCCCGAG
ATCCACCAGT ACGCCCCGCA TGCCCGGTAC GTTGCGCGCA ATGGCGAGAT CAACGCCTGG
GACAACCCGG AGTTCGTCGC TGCCGTCAAG GCCACTGGGC GCAGGCAGCT CATCATCGCG
GGGACGATCA CCAGCGTCTG CATGGCCTTC CCCAGCATCG CCGCAGTGCA TGAGGGCTAC
CAGGTCTTCG CGGTGATCGA CGCCTCGGGG ACCTACTCGA AAATGGCTCA GGAAATCACG
CTGGCGCGCA TCGTGCAGGC TGGTGTCGTG CCGATGGACA CGGCGGCGGT GTGCTCGGAG
GTGCAAAAGA CCTGGAACCG TGAGGACGCG TTGCAGTGGG CGCAAGCCTA CAGCGCAGTC
TTCCCGCCTT ACCAGTTGCT GATCGAAAGC TACTCCAGGG CACAGGAAGT GGCCAGGAAC
GGTGAGCAGC TGGATTCGCA ACGCACCTGA
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| Protein sequence | MSTPQTIANF NGTRPVIDPD NVAMLLIDHQ SGLFQTIKDM PFTEVRANAT TLAKVATLAK
IPVITTASVP QGPNGPLIPE IHQYAPHARY VARNGEINAW DNPEFVAAVK ATGRRQLIIA
GTITSVCMAF PSIAAVHEGY QVFAVIDASG TYSKMAQEIT LARIVQAGVV PMDTAAVCSE
VQKTWNREDA LQWAQAYSAV FPPYQLLIES YSRAQEVARN GEQLDSQRT
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