| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2817 |
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| Symbol | |
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| ID | 5748393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3093023 |
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| End bp | 3094486 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297912 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001563840 |
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| Protein GI | 160898258 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.151028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.354487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCT CCGACCTGCT GACCAGTCCC TTGCAATCCG GCCCTGGAGC GGCTCCCCGC
CAGCGCCAAC TGATCCAGCG CCTGAAGCAG GCCATCCTGG CGGGCCGCCT GCCGGCCGGT
GACCGCCTGC CGGCCTCGCG CGCCCTGTCG GAGGATCTGG GAGTCTCGCG CAACACCGTG
CTCATCGCCT ACGAGCAACT GGCGGCCGAA GGCTATGTGG TCGCCGACCG GCAGGGCACG
CGCGTGGCGG CTGTATCCAC CCATTCCACG GCAGCCGCCG AGGCCGCCGC CCCGCCTCCC
TGCGCACCCC GCACGGCCCG CCGCCTGGAC CGCATCGCGC CCACACGCCA CGCCATCGAC
CGCAGCCTGC CCCTGACGCC GGGCACGCCC GCGCTGGACA GATTCCCCTT GCCCGCCTGG
CGCCGTTCGC AGGACCGCGC ATTGCGCCTT CCCGCCAGCG CCACGCTGGA CTATGGCGAC
CCTGCGGGCG AGCCTGCACT GCGCCAGGCC ATTGCGCAGC ACCTGCGCAT CTCGCGCGGC
GTGCGCTGCG ATGCCTCGCG CATCATCGTC ACCGAAGGCG CCCAGGGTGC GCTGGACCTG
TGCGTGCAAC TGCTCTCCAA CCCGGGCGAC CATGCCTGGC TGGAGGAGCC CGGCTACCGG
GGCGCCAAGT CGGCCTTTGC GGGGGGAGAC CTGTGCGTCA GCACACTGCG CGTGGATGCG
GATGGCGCAG CCATCGCGCC CGGCCTGTGG GACAGCCATC CTCCACGGCT GATCCAGATC
ACGCCATCGC ACCAATATCC CACGGGCGCC GTGCTGTCGG TGGCGCGCCG GCTGGACCTG
CTGGAGCGCG CGCGCCGCGC GGGGGCCTGG ATCATCGAGG ACGACTACGA CAGCGAATTC
CGCCACCAGG GCACGCCCAT CGCAGCCATG CAGGGCCAGG TGCCGGATGC GCCCGTGCTC
TATGTGGGCA CCTTCAGCAA GACCATGTTC CCGGCATTGC GCCTGGGCTT TGTGGTGCTG
CCGCAGGCCC TGGCGGCCAG CGCCGCAACG GCCGTGCAGG AGATGCTGCG CGGCGGCCAT
CGACTGGAGC AGCTGGCCCT GGCGGACTTC ATGGACAGCG GCCAGTTCTC GCGCCACCTG
GGCCGCATGC GGCGCCTGTA CCGCGAGCGC CAGGCGGCCC TGCGCGAGGC GCTGGCCACG
CAACTGGGCG TGGAGCACGA GGTGCTGGGC GGCCACGGCG GCCTGCACCT GACGGTGCGG
CTGCCGCCGG ACCTGTCCGA CCGTGCCATC GTGGAGCAGG CACGGCGCGC CGGCATGAAC
CCGGGCGCCC TCTCGTCCTT CGCCCTGGCA CCGCTGCCCC AGGACAACGG CCTGGTGATC
GGCTATGGCA ACACCGATGC CGCGCGCTTC GGCGCACTGG TCAGGCGGCT GGGCAAGCTG
GCGGCAGCTG CGTTACCGCG CTAG
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| Protein sequence | MHASDLLTSP LQSGPGAAPR QRQLIQRLKQ AILAGRLPAG DRLPASRALS EDLGVSRNTV
LIAYEQLAAE GYVVADRQGT RVAAVSTHST AAAEAAAPPP CAPRTARRLD RIAPTRHAID
RSLPLTPGTP ALDRFPLPAW RRSQDRALRL PASATLDYGD PAGEPALRQA IAQHLRISRG
VRCDASRIIV TEGAQGALDL CVQLLSNPGD HAWLEEPGYR GAKSAFAGGD LCVSTLRVDA
DGAAIAPGLW DSHPPRLIQI TPSHQYPTGA VLSVARRLDL LERARRAGAW IIEDDYDSEF
RHQGTPIAAM QGQVPDAPVL YVGTFSKTMF PALRLGFVVL PQALAASAAT AVQEMLRGGH
RLEQLALADF MDSGQFSRHL GRMRRLYRER QAALREALAT QLGVEHEVLG GHGGLHLTVR
LPPDLSDRAI VEQARRAGMN PGALSSFALA PLPQDNGLVI GYGNTDAARF GALVRRLGKL
AAAALPR
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