| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2665 |
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| Symbol | |
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| ID | 5748241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2932123 |
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| End bp | 2933850 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297760 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_001563688 |
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| Protein GI | 160898106 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.079848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTC TTTTTGTGGT GATCGCAGCC GCCGGGCACG ACGCCGAAGC GCTGCTGGCC
GCCGAAGCCC TGCGCCATGC GGCCGGACAG CGTCCCTTGG CCGTGGAGGT GCGCGCCAGC
GGCGGTGTGA TCGGGCTGCA TGCGGCCGAT GCCGCCGCGC AGGCCGGGCA ATTGCTGATC
GTGGGGGATG CCGGCACCGA TGACGATGCT GACACCGCCG CCGATGCCTC CCGCTTCGTG
CAGGCCGCCG TCGAGCGCTG CAGCCTGCGC GAGGCGCTCG ACGATCCGGC CGGCGTGCTT
GCGCGCTGCG CTGCCGCCAG TCCCGCAGTA CAGCGCACGG GCAAGCGGAT CGTGGCCGTC
ACCTCCTGCC CCACGGGCAT CGCCCACACC TTCATGGCGG CCGAGGGACT GCAGCGCGGC
GCGGCGGCGC TGGGCCACGC CATGCGCGTG GAGACGCAAG GCTCGGTGGG CGCGCTCGAT
GCGCTGACGC CGCAGGAGAT TGCCGAGGCC GACCTGGTCA TCATCGCCGC AGACCGCGAG
GTCGATCTTT CGCGCTTCGC CGGCAAGCCG CTGCTGCGCA GCGGCACCAA GCCGGCCATA
CGCGACGGCT CGGGGCTGAT TGGCCGGGCG CTGGCCGAAG CCACCGTGCA TGGTGCCGGC
GTGGGCGCTG CTGCAGGCAG CGCCGCGCCC ACGCCGGCCC GGACCCAGGG CGGTGCCTAT
CGCCACCTGA TGACCGGCGT GTCCTTCACG CTGCCCTTCG TCACGGCGGG CGGCATTCTG
ATCGCCATGG CCTTTGCGCT GGGCGGCATC TATGTCCATG ACGATGCGCA CCAGGGCACG
CTGGGATGGA CGCTGTTCCA GATCGGCGCC AAGGGCGGCT TTGCGCTGAT GGTGCCGGCG
CTGGCCGGCT ATATCGCCTA TTCCATTGCC GACCGGCCCG GCATTGCGCC GGGCATGATC
GGCGGGATGA TCGCGTCCAG CATGGGCGCA GGCTTCATCG GCGGCATCGC GGCCGGCTTC
ATCGCCGGCT ACGGCGTGGC CTTCATGGCG GCGCACATCC GGCTGCCGCA GGCGCTCAAG
GGCCTGCTGC CCATGCTGAT CCTGCCCGTG CTGGGCAGCC TGTTCACGGG GCTGCTGATG
TTCTATCTGG TCGGTGCGCC CGTGGCCGAG CTGCTGCAGT GGCTGAGCGC CTGGCTGCGC
GGCATGCAGG GTGCCAGTGC CTTGCTGCTG GGCCTGTTGC TGGGCGCGAT GATGGCCTTT
GACATGGGCG GGCCGGTGAA CAAGGCCGCC TATGCGTTTT CCACGGGAAT GATCGCGAGC
CAGGTCTACA CGCCCATGGC TGCGGCCATG ATCGCCGGCA TGACGCCGCC GCTGGGGCTG
GCCCTGGCCA CGCGCCTGTT TGCCGACCGC TTCACGCGCG AGGAGCGCGG CAGCGCCGCC
TCGGCCGGCG TGCTGGGCCT GGCCTTTGTC ACCGAGGGGG CCATTCCCTA CGCGGCGCGC
GATCCGTTGC GCACGATTCC GGCCCTGGTG CTGGGCTCGG CCGTGGCCGG CGCCGTGTCC
ATGCTGGCGG GTGTGGAGCT GAAGGTGCCG CATGGCGGCA TCTTCGTCGC GCCCATTCCC
AACGCCGTGA CCCACGTGGC CATGTATGCG GTGGCGCTGG TGGCGGGCGT GGTGGTCACG
GCCATCGCCC TGCGCATGTT CAAAAGGCCC GCCGAAGCGG GCCTTTGA
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| Protein sequence | MNPLFVVIAA AGHDAEALLA AEALRHAAGQ RPLAVEVRAS GGVIGLHAAD AAAQAGQLLI
VGDAGTDDDA DTAADASRFV QAAVERCSLR EALDDPAGVL ARCAAASPAV QRTGKRIVAV
TSCPTGIAHT FMAAEGLQRG AAALGHAMRV ETQGSVGALD ALTPQEIAEA DLVIIAADRE
VDLSRFAGKP LLRSGTKPAI RDGSGLIGRA LAEATVHGAG VGAAAGSAAP TPARTQGGAY
RHLMTGVSFT LPFVTAGGIL IAMAFALGGI YVHDDAHQGT LGWTLFQIGA KGGFALMVPA
LAGYIAYSIA DRPGIAPGMI GGMIASSMGA GFIGGIAAGF IAGYGVAFMA AHIRLPQALK
GLLPMLILPV LGSLFTGLLM FYLVGAPVAE LLQWLSAWLR GMQGASALLL GLLLGAMMAF
DMGGPVNKAA YAFSTGMIAS QVYTPMAAAM IAGMTPPLGL ALATRLFADR FTREERGSAA
SAGVLGLAFV TEGAIPYAAR DPLRTIPALV LGSAVAGAVS MLAGVELKVP HGGIFVAPIP
NAVTHVAMYA VALVAGVVVT AIALRMFKRP AEAGL
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