Gene Daci_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2660 
Symbol 
ID5748236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2925187 
End bp2925825 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID641297755 
Productputative ParB-like nuclease 
Protein accessionYP_001563683 
Protein GI160898101 
COG category[S] Function unknown 
COG ID[COG4318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.683597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.548694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAC AGCAGCATCT GACCCGGGTT TCGCTGGACG CACTGCGTCC TACGCAGATG 
ACCATAGGCG CCGCCGAAGT GCAGACCAAG CGCGCCCAGT GGAGCCGCCT CAAGCGCAAG
GAGCGCGAGG GCGTTCTGGC CTCGCACTGG TTTCCGGCCG TGCTGGGACC GCGTGGCCTG
CACTACATCG TTGACCACCA CCACCTGGGG CTGGCGCTGA CGCAGGAGTC CGTGGAGCAG
GTCTGGGTCA TGCAACTGGC CGATTTCAGC GAGGCCGATC CGCTGATGTT CTGGCGCCTG
ATGGAGTTCC ACCAATGGGC CCATCCGTAT GACGAGCGCG GCCGCCGCTG CGACTGGACC
AAGATGCCCG AGCAGCTGGA CCGCCTGCGC GACGACCCCT ACCGCAGCCT GGCCGGCGCC
GTGCGCAAGG CCGGTGGCTA TGCCAAGGAC ACTGCGCCTT TCGTCGAATT CCTCTGGGCC
GATTTTTTCC GCACGCGCTT TGCACCCAAG GACCTGCGCA GTGGCAAGAG CGATGTTGCC
TTGCCCGATC AGGCCCTGCA TGAGGCCCTG GGCCTGGCGC ACGGCGCCGA GGCGCGCTAC
CTGCCGGGCT GGTCCGGCGT CGTTGCTCCG CAATCCTGA
 
Protein sequence
MRAQQHLTRV SLDALRPTQM TIGAAEVQTK RAQWSRLKRK EREGVLASHW FPAVLGPRGL 
HYIVDHHHLG LALTQESVEQ VWVMQLADFS EADPLMFWRL MEFHQWAHPY DERGRRCDWT
KMPEQLDRLR DDPYRSLAGA VRKAGGYAKD TAPFVEFLWA DFFRTRFAPK DLRSGKSDVA
LPDQALHEAL GLAHGAEARY LPGWSGVVAP QS