Gene Daci_2591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2591 
Symbol 
ID5748161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2864156 
End bp2864665 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID641297680 
Productphage major tail tube protein 
Protein accessionYP_001563614 
Protein GI160898032 
COG category[R] General function prediction only 
COG ID[COG3498] Phage tail tube protein FII 
TIGRFAM ID[TIGR01611] phage contractile tail tube protein, P2 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.213211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000491617 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGACTGC CCCGCTCTCT CAAGAATTTC GCCACCTTCG TGGATGGCAA CTCGTACATC 
GGCGACATGC CCGAAGTGGG CTTGCCCAAG CTCACCCGCA AGATGGAGAA GTACCGCGCC
GGCGGCATGA ACGGCGAGGT CAGCCTGGAC TTCGGCATGG AGGCCATCGA GGCCGACCTG
ACCGCTGCCG GCTACATGAA GGAGTTGATC TCCACCTGGG GCACGCTGCG CCACGACGGC
GTGCTGCTGC GCTTCGCCGG CGCCCTGCAG GGCGATGACA GCGAAGGCGT GGACTCGCTG
GAAGTGGTCA TGCGTGGCCG CTTCTCGGAG TTCGACCCCG GCAAGGCCAA GGCCGGCGAC
AAGACCGAGA TCAAGTACAA GCTGGCCGTC AGCTACTACC GCCTGTCCAT CAACGGCCAG
GTGCTGATCG AGATCGATCC GGTCAACTTC GTCGAAGTCG TCAACGGCAT CGACCGCCTC
GCGCAGGTCC GCGCCGCGCT GGGCATCTGA
 
Protein sequence
MGLPRSLKNF ATFVDGNSYI GDMPEVGLPK LTRKMEKYRA GGMNGEVSLD FGMEAIEADL 
TAAGYMKELI STWGTLRHDG VLLRFAGALQ GDDSEGVDSL EVVMRGRFSE FDPGKAKAGD
KTEIKYKLAV SYYRLSINGQ VLIEIDPVNF VEVVNGIDRL AQVRAALGI