Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2591 |
Symbol | |
ID | 5748161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2864156 |
End bp | 2864665 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641297680 |
Product | phage major tail tube protein |
Protein accession | YP_001563614 |
Protein GI | 160898032 |
COG category | [R] General function prediction only |
COG ID | [COG3498] Phage tail tube protein FII |
TIGRFAM ID | [TIGR01611] phage contractile tail tube protein, P2 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.213211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000491617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGACTGC CCCGCTCTCT CAAGAATTTC GCCACCTTCG TGGATGGCAA CTCGTACATC GGCGACATGC CCGAAGTGGG CTTGCCCAAG CTCACCCGCA AGATGGAGAA GTACCGCGCC GGCGGCATGA ACGGCGAGGT CAGCCTGGAC TTCGGCATGG AGGCCATCGA GGCCGACCTG ACCGCTGCCG GCTACATGAA GGAGTTGATC TCCACCTGGG GCACGCTGCG CCACGACGGC GTGCTGCTGC GCTTCGCCGG CGCCCTGCAG GGCGATGACA GCGAAGGCGT GGACTCGCTG GAAGTGGTCA TGCGTGGCCG CTTCTCGGAG TTCGACCCCG GCAAGGCCAA GGCCGGCGAC AAGACCGAGA TCAAGTACAA GCTGGCCGTC AGCTACTACC GCCTGTCCAT CAACGGCCAG GTGCTGATCG AGATCGATCC GGTCAACTTC GTCGAAGTCG TCAACGGCAT CGACCGCCTC GCGCAGGTCC GCGCCGCGCT GGGCATCTGA
|
Protein sequence | MGLPRSLKNF ATFVDGNSYI GDMPEVGLPK LTRKMEKYRA GGMNGEVSLD FGMEAIEADL TAAGYMKELI STWGTLRHDG VLLRFAGALQ GDDSEGVDSL EVVMRGRFSE FDPGKAKAGD KTEIKYKLAV SYYRLSINGQ VLIEIDPVNF VEVVNGIDRL AQVRAALGI
|
| |