Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2581 |
Symbol | |
ID | 5748151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2855560 |
End bp | 2857539 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641297670 |
Product | replication gene A |
Protein accession | YP_001563604 |
Protein GI | 160898022 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00609775 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000126543 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGTCC TGCTCGCCGC CAAATCCACC GGCCGCAGGC TGCGCACCGC CAGCCTGCAG CAATGGGACC AGCACAAGCC CCGCCCCCAC ATGGTCCAGC GCGCCATGCA GGCGCTGGAA AAAGCCTTGC CGCCGCAGTG GCTGCAGCCC ATGAAGCTGC TGGGCCTGGG CGACTGGCAA AAGGGCGCGC AACACGCCAA CGGCCAGCCC GAATGGGCCG CCTGCCACGA CGCGCTGGCC GCCATTGACG ACTTTGCCAG CCGCCACGGC CGTGCGGCCG AATGGAATCT GGACGACTAC GAGATCTGCC AGATGGCCAG GCGCCTGAGC GACGAAGTCG GTGAGCTCGA CGCCGGCGCC CAGGCCCAGA ACATGGACCT GGCCGCACGC GTGGACCTGG TGCGGCTGAT GCTGCGCATG CTGGGCCTGC AGGAAAGCAC GCCGCTGGCC GGCGAGCCCG CCATCCGCCG CGCGCTGGAT GCCGCCTGGT GGCGCCGCAT GCTGCGCCGC CACGTCACGC GCACCGTGGA GGCTGGCGCC GTCAAGCTGG GCATCGTCAA CCGCAGCGCC GGCGGCTATG CCAGCAATAC CACCGTGCGC CGGCGCACCG CGCAGATCGA ACGCAACGCC CGCGCGCTGG AGCGCAGCCT CTACCGAAAC GAGGCCGGCC AGGTCTTCAC CCTGGCCGAG CTGGCCGCGC TGTCGCCGGC CAACCCCGTG ATCCGTGGCG GCGAGCTGAT GACGCGCATC CGCGGCGCAG AGGAATATGC CGACGCGCGC AGCCACGTCG GTCTCTTTCT CACGCTGACG GCGCCCAGCC GCTTTCACGC CGTCACGCTG GGCAGCGGCG GCCGGCCGCG CCCCAATCCC CATTACGACG GCCGCAGCAC GCCGCGCGAT GCCCAGCTGT GGCTGCGCAC CATGTGGGCG CGCGTGCGAT CTCACCTGGG CCGCCAGCGC ATCGCCATGT ACGGCATCCG CGTGGCCGAG CCGCACCATG ACGCCACGCC GCACTGGCAC GCCCTGGTCT GGGCCGAGTG CGAGGAGCAC GCCCGGCACA TCGAGGCCGC CATCCGCAAA TGGTGGCTCA GCGAAGATGG CGACGAGCGC GGTGCCCAGC GCAACCGCGT CAACGTCAAG CGCATGACCG GCGGCGGCGC TGCCGGCTAC GTGGCCAAGT ACATCGCCAA GAGCGTGGGC CATGCGGCCC TGGCCGACCA CCTCGACGTG GTGCAGGGCC GCCTGTGGGA TGTGGAGCAG GGCGGCATGC CCGGCCACCG CCGCGTGGAC GCCTGGGCCG CCTGCTGGGG CATTCGCCAG TTCCAGGCCG TGGGCATGCC CAGCGTCTGC GTCTGGCGCG AGCTGCGCCG TGTCAGCAAG GACCAGGTCG AACAGATCCG CATCGACGGC GACAAGGCCA GCTGGAAGGC CTGGGGCGCC AGCCACCGCC ACGGGCCCGA CATCCCCGCC GACTGGCGCC TCTACATGGA AGCCATGGGC GGCCACTGCC TGGCCCGCGA CCGCTGGCAT CTGCGCATGG CACGCCGCCC CGTGCCCGCC GGCGCCGTCA ACCAGTACGG CGAGGCCATC GCGCCCGGCT GCGGCCGCGT GGTGGGCCTG GAAACCCGGC GCGGCCAGTG GCTGGTCTCG CGCCGCATCG CCTGGCGCAG CGTGGCTCGC GCCACGCTGG AGTTCCAGGA AAACCACGGT GCAGAAAGCG TCGAGGGCGC CGAGGGTGCC GAGGTCGCCG ACACGGCCCC GCCCGCCCCG CCCGCCCTGC CCGCCCGCGC GCCGCTGGCG CGCGCTTGGA CTGGTTTCAA TAACTGTACG GCCCGGCTCA CGGGCCACAC GCTGCGCGCC CTCATCGGCC GCGGCGGGCA CCAGCGCGAG GACCGGGCCA ACCCTTCCGC GCCCGATTCC GTGCTGCACC GCCCCGCATC CGGCGCCACG CCATCCAACC ACCCTTTCTT GACCAGCTGA
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Protein sequence | MSVLLAAKST GRRLRTASLQ QWDQHKPRPH MVQRAMQALE KALPPQWLQP MKLLGLGDWQ KGAQHANGQP EWAACHDALA AIDDFASRHG RAAEWNLDDY EICQMARRLS DEVGELDAGA QAQNMDLAAR VDLVRLMLRM LGLQESTPLA GEPAIRRALD AAWWRRMLRR HVTRTVEAGA VKLGIVNRSA GGYASNTTVR RRTAQIERNA RALERSLYRN EAGQVFTLAE LAALSPANPV IRGGELMTRI RGAEEYADAR SHVGLFLTLT APSRFHAVTL GSGGRPRPNP HYDGRSTPRD AQLWLRTMWA RVRSHLGRQR IAMYGIRVAE PHHDATPHWH ALVWAECEEH ARHIEAAIRK WWLSEDGDER GAQRNRVNVK RMTGGGAAGY VAKYIAKSVG HAALADHLDV VQGRLWDVEQ GGMPGHRRVD AWAACWGIRQ FQAVGMPSVC VWRELRRVSK DQVEQIRIDG DKASWKAWGA SHRHGPDIPA DWRLYMEAMG GHCLARDRWH LRMARRPVPA GAVNQYGEAI APGCGRVVGL ETRRGQWLVS RRIAWRSVAR ATLEFQENHG AESVEGAEGA EVADTAPPAP PALPARAPLA RAWTGFNNCT ARLTGHTLRA LIGRGGHQRE DRANPSAPDS VLHRPASGAT PSNHPFLTS
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