| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2556 |
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| Symbol | |
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| ID | 5748125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2829472 |
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| End bp | 2831676 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297644 |
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| Product | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane |
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| Protein accession | YP_001563579 |
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| Protein GI | 160897997 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.405834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGC GTGAAGAGAT GGTGTCGTCG ATTCCTGCAA CCCCCTGGCG CTGGGCCTTC
ACGGCGCTGG CGGCGGCCGC GCTGGCAGCC TGCGGCAGCG GCGAGCATGA ACCCAGCAAC
GATCTGCCCA AGGGCTTTAC CGAGCTGGGC GCCACGGTGT ATCCGGCCAC GGCCACCGGC
ACGGGAGCCA CGGCAGCCAC GCAGGACTTG CTGACGGGCG GCCTGGGCAA GACGGGCCTG
GGCGCCGCAG CCGCGCCCCT GTATGCGGAC CCTGCCAATC CCACGGCGGC AGAGCTGCGG
CGCAATGCGC TGTACTCCAA CTACCGGGGC ATCCTGGACC CCACGGCGGG CGGCGGCTAC
GGCACGCTGT ACGGCCCCAA CATCACGGCA GACGGGCAGG TGACCACGGG CGAAGGGCTG
ATCCCCGGGC GCGAGTACCT GGCCGTGCTG GACGACGGCA CGGGCCGCAA GCAGACCATG
GTGGCCGTGC AGGTGCCGGA CAGCTTTGAC CGCAACCGGC CCTGCATCGT GCTGGGCCCG
TCCTCTGGCT CGCGCGGCGT GTATGGCGCC ATCGGCACGG CGGGCGAGTG GGGCCTGAAG
AAGGGCTGCG CCGTGGCGCT GACCGATGCG GGCAAGGGCG TGGGCCTGCA CAACCTGAGC
GACGACACCG TCAACAAGCT GGACGGCACG CGCGCCACGC GCACGGACGC CGGCAGCCTG
TCCTTCTTTG CCGCGCGGCT GACCGATGCG GCGCGCGCCG CCTACAACGC TGCGTTTCCC
AACCGCATCG CCATCAAGCA CGCGCACTCC CAGCAGAACC CTGAAAAGGA CTGGGGCAAC
GACACGCTGG CCGCGGCCCG CTATGCGCTG TACGTGCTCA ATGCCCGCTA TGGCACCACG
CAGGACCCCG TGCCCTTCGG CAAGGACAAC ACGCTGGTGC TGGCAGGCTC GGCCTCCAAC
GGCGGCGCGG CCGTGCTGCG CGCGGCCGAG CTGGATGCGG ACGGCCTGAT CGACGGCGTG
GTGGCCTCCG AACCCGTGAC CGAGATGCCC ACGCGCCAGG GCTACACCAT TGCCGTGGGC
AATGCGACCA TGCCCAACCC GGGCCGCCCG CTGGCCGAGT ACACCACCTA CGGCAACATC
TACCAGCCCT GCGCGGCGCT GGCCCCCGAT GCGGCGCTGA CCGAGACATC CATCTTCAAC
TACATAGGCC TCACGGCCAT GACGGCGCGG GCCGAGGCAC GCTGCAACAG CCTGGCCGCC
AAGGGCCTGG TCATTGGCAG CACCACGGCC GACCGCGCCG CCAATGCGCT GAGCAAGCTG
CGCCTGTACG GCTGGACGCG CGACCATGAC GCCATGCACA ACGCCCACTA CGCGCTGGGC
AACGGCCCCA TCCTGTCGGC CATGTACACC ATGGCCTATG GCCGGTTTGG CGTGGATGCC
AACCTGTGCC GCACCAGCTT TGCGGCCGCC AATGCCACGG GCGACGTGGT GCCCGCCACG
GGGGCTGCGC TGGCGCAGAG CTTTGCCACG GCCAATGGCA CGGCCAACGG CACGCCCGCC
ACGGTGGTTT ACAACGACTC GGTGGGCGGG GCCAAGGCCT GGCAGTTTGC CGTGTCGCCC
TCCACGCGCG TGGCCGACCT GGGCCTGGAC AACGCGCTGT GCCAGCACGC GCTGGTGACG
GGCTTCGATC CGGTGACCGG CTTCAATCTC TCCGAAAGCA GCGTGCCCAC GCGTGCCCAG
AGCGACGCCG TGCGCGCCGG CATCAACGAG GTGCTGCACA CCGCCAAGCT GCGCGGCAAG
CCCACCATCA TCGTGGCGGG CCGCAGCGAT GCGCTGGTGC CGGTCAACCA CAATGCGCGC
GCCTACACGG TGCTCAACCG GGGGCTGGAC GGCAGCAACA CGCGGCTGCG CTATATCGAG
GTGGTGAATG CCCAGCACTT CGATGCCTTC CTGCCGTTCT CCGGCTTCGA CACCCGCTTC
GTGCCGCTGC ACCCGTACTT CAACCAGGCC ATGGATGCCG TGTGGGCCAA CCTGCGCAGC
AGCACCGCGC TGCCCGCCAG CCAGGTGGTG CGCACCACGC CGCGCGGCGG CCAGCCGGGC
GCGGCGCCCG CCATCACGGC GGCGCAGGTG CCGCCCTTCG TGGCGCGGCC CAGCACGGCC
AACACCATCG AGGTCAGCGA CGGGCTGATC CGCATTCCTG AGTGA
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| Protein sequence | MLKREEMVSS IPATPWRWAF TALAAAALAA CGSGEHEPSN DLPKGFTELG ATVYPATATG
TGATAATQDL LTGGLGKTGL GAAAAPLYAD PANPTAAELR RNALYSNYRG ILDPTAGGGY
GTLYGPNITA DGQVTTGEGL IPGREYLAVL DDGTGRKQTM VAVQVPDSFD RNRPCIVLGP
SSGSRGVYGA IGTAGEWGLK KGCAVALTDA GKGVGLHNLS DDTVNKLDGT RATRTDAGSL
SFFAARLTDA ARAAYNAAFP NRIAIKHAHS QQNPEKDWGN DTLAAARYAL YVLNARYGTT
QDPVPFGKDN TLVLAGSASN GGAAVLRAAE LDADGLIDGV VASEPVTEMP TRQGYTIAVG
NATMPNPGRP LAEYTTYGNI YQPCAALAPD AALTETSIFN YIGLTAMTAR AEARCNSLAA
KGLVIGSTTA DRAANALSKL RLYGWTRDHD AMHNAHYALG NGPILSAMYT MAYGRFGVDA
NLCRTSFAAA NATGDVVPAT GAALAQSFAT ANGTANGTPA TVVYNDSVGG AKAWQFAVSP
STRVADLGLD NALCQHALVT GFDPVTGFNL SESSVPTRAQ SDAVRAGINE VLHTAKLRGK
PTIIVAGRSD ALVPVNHNAR AYTVLNRGLD GSNTRLRYIE VVNAQHFDAF LPFSGFDTRF
VPLHPYFNQA MDAVWANLRS STALPASQVV RTTPRGGQPG AAPAITAAQV PPFVARPSTA
NTIEVSDGLI RIPE
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