Gene Daci_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2548 
Symbol 
ID5748117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2821582 
End bp2822163 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content67% 
IMG OID641297636 
ProductFMN reductase 
Protein accessionYP_001563571 
Protein GI160897989 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID[TIGR03566] FMN reductase, MsuE subfamily 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.33776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTC CGCTCCGTCT GGTCGCCGTT TCCGGTGGAC TGCAGCGCCC CTCCAAATCT 
GCCGCCCTGG CAGAGCATCT GTCTGATCTG ATCGCCGCCG AAGTTCCGTG CGAACAGCGC
CTGGTGGAGC TGGGCCAGCT TGCGCCGCAG CTTGCCGGCG CGGTGTGGCG CTCGCAGTTG
CCCGAGAGGG TGGAGCGTGA GCTTGCGGCG GTGGAGCAGG CGGATGTGCT GGTGGTGGCC
ACCCCGGTCT TTCGTGGCGC CTACACCGGA CTGTTCAAGC ACTTCTTCGA CTTCGTCCAC
CAGGACGCCT TGATCGACAA GCCCGTGCTG CTGGCGGCCA CCGGTGGCAG TGAGCGCCAT
GCCCTGGTGA TCGACCACCA GCTGCGGCCG CTGTTCAGCT TCTTCCAGGC GCGCACGCTG
CCGTTGGGCG TGTACGCGAC CGACAAGGAT TTCGTGGACT ACCGCCTGCA CGACGAGGCC
CTGATACAGC GGGCCGCACT GGCGGTGCAA CGGGCATTGC CGCTGGTCGA GCTGATGCAC
CGCGCCAGGC CCTGCCTGGC CGAGGAAATG GCTGCGGCCT GA
 
Protein sequence
MSRPLRLVAV SGGLQRPSKS AALAEHLSDL IAAEVPCEQR LVELGQLAPQ LAGAVWRSQL 
PERVERELAA VEQADVLVVA TPVFRGAYTG LFKHFFDFVH QDALIDKPVL LAATGGSERH
ALVIDHQLRP LFSFFQARTL PLGVYATDKD FVDYRLHDEA LIQRAALAVQ RALPLVELMH
RARPCLAEEM AAA