Gene Daci_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2546 
Symbol 
ID5748115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2819309 
End bp2820283 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID641297634 
Producthypothetical protein 
Protein accessionYP_001563569 
Protein GI160897987 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.530623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAAC GCAGACTGAT CGCAGGCGGC GCCCTGGCCG CCCTTCTTTC CCTGGCCGTG 
GGCACCGCCC AGGCCCAGGA CTTCCCCCCC AAGAAACCCG TGGTCATGGT GGTCGGCTTC
GCCGCAGGCG GCTCGGCCGA CATTGCCGCG CGCATCATCG CCAAGAAGCT GGGCGAGAAC
ATCGGCCAGA GCGTGGTCGT GGAAAACAAG CCCGGCGCGG GCGGCAACCT GGCCCACACG
CAGGTGGCCA ATGGCCCGTC CGACGGCTCG GTGCTGCTCT TCGGCTCCAT CGGCCCGCTG
GCCATCGCGC CGCACTTCAT GAAGATCGGC TACGACCCGC TCAAGGACCT GGCCCCCATC
ACCATGGGCG TGAACTTTCC CAACGTGCTC GTCGTGCCTG CCGCCACCGG CATCAAGACC
CTGGGCGAAT ACGTGGCCAA GGCCAAGCGC GAACCCGGCA AGCTGGACTT CGCCTCCACC
GGCCCCGGCT CCGCATCGCA CCTGGCCGGT GAACTGCTCA ACGATGTCGC CAAGATCGAC
ACCCTGCACG TGCCCTACAA GGGCGGCGCG CCCGCCCTGC AGGACGTGCT GGGCAACCGC
GTGACCTCCT TCTACGCAGC CCCGCCCACG GCCCTGCCCC ACATCGAATC CGGCAAGCTG
ATCCCGCTGG CCACCACGGG CCTCACGCGC CCCGCCTATC TGCCCAATGT GCCCACCGTG
GCCGAGAGCT TCCCCGGCTT CAACGCCACC AACTGGTACG CCTTCGTGGC ATCCGCCAAG
ACGCCCAAGC CCTTGCTGGA CCGCTGGAAC ATCGAGCTGG TCAAGGTGCT GAACACCCCC
GAAGTGCGCG ACAACCTGCT CAAGCACGGC CAGACCGCCG CCCCGGGCAC CCGCGAGGAA
CTGGGCCAGT TCATCGCCGC CGAGCACGCC AAGTGGGGCC GCATCATCCG CGAGCGAAAA
ATCACCGCCG ATTGA
 
Protein sequence
MHQRRLIAGG ALAALLSLAV GTAQAQDFPP KKPVVMVVGF AAGGSADIAA RIIAKKLGEN 
IGQSVVVENK PGAGGNLAHT QVANGPSDGS VLLFGSIGPL AIAPHFMKIG YDPLKDLAPI
TMGVNFPNVL VVPAATGIKT LGEYVAKAKR EPGKLDFAST GPGSASHLAG ELLNDVAKID
TLHVPYKGGA PALQDVLGNR VTSFYAAPPT ALPHIESGKL IPLATTGLTR PAYLPNVPTV
AESFPGFNAT NWYAFVASAK TPKPLLDRWN IELVKVLNTP EVRDNLLKHG QTAAPGTREE
LGQFIAAEHA KWGRIIRERK ITAD