Gene Daci_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2411 
Symbol 
ID5747974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2660747 
End bp2661835 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content72% 
IMG OID641297493 
Productphosphonate metabolism-associated iron-containing alcohol dehydrogenase 
Protein accessionYP_001563434 
Protein GI160897852 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID[TIGR03405] phosphonate metabolism-associated iron-containing alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGACCT ATCACAACCC CGTTGCCATC CATGCCGGCC CCGGCCGCCT GGACCGCCTG 
CCCGAGCTGC TGGCCGGGCG CGACTGCCTG CTGGTGACGT TTCCCGAGGC CGAATCCCTG
GGCCTGGTGC AGCAGCTGCG CCAACGGCTG GGCAGCCAGC TGCGCGGCGT GGTGGACGGC
ATTGCGCCCA ACCCCGATGT GCAGTGGCTG GCCCCGCTGT ATGACCGCGT GCACCGCGAA
TACGCCGAGG TCCCGTGCAT CGTGGCCCTG GGCGGCGGCA GCGCCATCGA CTCGGCCAAG
GCGCTGATGT GCGCCACGCC CACGCGGCGT TTCGGCGAGC TGTTGCAGGC CCTGGAGCAG
GGGCTGGCCC TGCCGGCCGC AGGCCACAAG GCGCTGATCG CCATCCCCAC CACGGCCGGC
ACGGGCAGCG AGGTCACGCC CTGGGCCACG ATCTGGGACC AGGCCGCTGG CCGCAAGCAC
TCGCTGCACC AGCACTGGAC CTGGCCCGAG GCCGCCATCA TCGACGCGCA GCTCATGCAA
AGCCTGCCGG CCGGCGCCAC GCTGGCCTCG GGGCTGGATG CGCTGTCGCA TGCGCTGGAG
TCCATCTGGA ACCGGCACCG CAATCCCGTC TCCACCACCT TGGCCGTGGG CGCCGCGCGC
CGCACCCTGG CCACGCTGCC CGCGCTGATG CAGGACCTGG GCAGCCTGCC GCTGCGAAGC
CGCATGGCCG AGGCCGCCCT GATGGCCGGC CTGGCCTTCT CCAACACCCG CACGGCGCTG
GCGCATTCGC TGTCCTACGA CATCACGCTG CGCCATGGCG TGGCCCACGG CATTGCCTGC
TCGTTCAGCC TGCCACTGGT GCTGGAGATG GCCCTGGGCG CCGACGACCA GGCCGACGCG
GCCCTGCTGT CCATCTTCGA TGCCGCCACG GGCGAGCTGG CCGTGCAGCG CCTGCGCAAC
TTCCTCGAAG GCCTGGGCGT GGCCACCGAT CCCGCCCACT ACGGCGTGCC TGGGGATGAG
TGGCAGCAGC TGCTGCAGTC GGCCGCATCC GGCCCGCGCG GGCGCAATTT CATCCGCACG
CTGGAATGA
 
Protein sequence
MWTYHNPVAI HAGPGRLDRL PELLAGRDCL LVTFPEAESL GLVQQLRQRL GSQLRGVVDG 
IAPNPDVQWL APLYDRVHRE YAEVPCIVAL GGGSAIDSAK ALMCATPTRR FGELLQALEQ
GLALPAAGHK ALIAIPTTAG TGSEVTPWAT IWDQAAGRKH SLHQHWTWPE AAIIDAQLMQ
SLPAGATLAS GLDALSHALE SIWNRHRNPV STTLAVGAAR RTLATLPALM QDLGSLPLRS
RMAEAALMAG LAFSNTRTAL AHSLSYDITL RHGVAHGIAC SFSLPLVLEM ALGADDQADA
ALLSIFDAAT GELAVQRLRN FLEGLGVATD PAHYGVPGDE WQQLLQSAAS GPRGRNFIRT
LE