Gene Daci_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2367 
Symbol 
ID5747930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2608148 
End bp2609071 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content69% 
IMG OID641297449 
Productextracellular solute-binding protein 
Protein accessionYP_001563390 
Protein GI160897808 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CAGGCCTTAC TTTCACTTCC ACAGCTGCGC AGATACGGCT GTCCGCATGG 
CGGCGCAAGT GGTCGCCGCT GCTGGCCGGC TGCGCGCTTG GCATGGCCCT GCTCATGCCC
GGCCTGGCTG CAGGCGCCGA CATGGTGCTG GCCACGCGCG TCACGGCCGG TGCAAAACCC
TGGCTCACGC CCGCGCACCG ACAGTGGCTG CAGGCGCGCG GGCCGCTGAC CGTGGGCATT
TCCCTGCCCG ACCATCCTCC CCTGGAGATG ATCGATGGCG AGCGCTTCCA GGGCATCACG
GCCGACCACC TGGGACTGCT GTTTCCCGCC CCGGTGCGCT TCAAGACCTA TGGATCGCGC
GTGGCCGTGC TCGATGCGCT GCGGCGCGGC GAGATCGACC TGGCCTGCGA GGGCACCGAG
CTGGAGGCCG AACGCGCCGA CCTGGCCCTG AGCGTGCCCT ACCTGCCCAG CCAGCCAGTG
CTGGTGTCGC TCTCGCATGC GCCCTTCGAC GCGGAGCGCC GGGGCGCGCG GCTGGCCATG
ACGCCCGACC AGCTGCTGCG CTCCCAGGTT GCGGCCGCCT ATCCTCTCAG CGAGCTGCTG
ACCTATGAAA CACCCCGCCG CGCGCTGGAG GCGCTGAGCC TGGGCGAGAT CGACGGCTTC
GTCGGCGACA CGGTCACGGT GCACTACCTG ATCCACGCCA ACTACCTGCT CAACCTGCGC
GTGCAGGGCT TTGCCCCCAT AGAAAGCCGG GGCTTCGGCA TGCTGGTGCG GCATGACGAT
ACGCAGCTGA AGGCCTATCT GGACCAGGCC CTGCCCGCCA TCACCTTGCA GCATGGCGAC
GACATTCTGC ACAGCTGGAG CGGCAGCCGC CGTCCGCTGC TGGGAAGCGA CCGCGTGGCC
CTGACACCCT CGGAAAAGCA GTAG
 
Protein sequence
MKTPGLTFTS TAAQIRLSAW RRKWSPLLAG CALGMALLMP GLAAGADMVL ATRVTAGAKP 
WLTPAHRQWL QARGPLTVGI SLPDHPPLEM IDGERFQGIT ADHLGLLFPA PVRFKTYGSR
VAVLDALRRG EIDLACEGTE LEAERADLAL SVPYLPSQPV LVSLSHAPFD AERRGARLAM
TPDQLLRSQV AAAYPLSELL TYETPRRALE ALSLGEIDGF VGDTVTVHYL IHANYLLNLR
VQGFAPIESR GFGMLVRHDD TQLKAYLDQA LPAITLQHGD DILHSWSGSR RPLLGSDRVA
LTPSEKQ