| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2324 |
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| Symbol | |
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| ID | 5747887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2557579 |
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| End bp | 2558418 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297406 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001563347 |
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| Protein GI | 160897765 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0765304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.954525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TGAGATTTGG CCCCGAGGGC CAGGAAAAGC CCGGCCTGCT GGATGCCGAA
GGCCAGATCC GCGATCTGTC CGCCCTGTTG GACGACTACA CGCCCCGCCT GCTGGGCCGC
AAGGCGCTGC GGGCCCTGGC CGCCATCGAC CCCGCCAGGC TGCCCCTGGT GCAAGGCCCG
GTGCGCATCG GCATGCCCTG GAGCGGTATG TCCAAGTTCG TTGCCATCGG CCTGAACTAC
CGCGACCATG CCGAGGAGGC CGGCATGCCC ATTCCCAAGG AGCCCATCCT CTTCGCCAAA
TGGCCCAGCT GCGCCTGCGG CCCCGACGAC GACATCCCCC TGCCCGAGGG CAGCACGCGC
ATGGACTGGG AGGTGGAACT GGGCATCGTC ATCGGCGAGC GCGCGCGCAA TGTGTCCGTG
GCCGATGCGC TGGAGCATGT GGCCGGCTAC TGCCTTGCCA ACGATGTGTC CGAGCGCGAA
TACCAGATCG ACCGCAGCGG TGGCCAATGG AGCAAGGGCA AGGGCTTCGA CCGCTTCGGC
CCCATCGGCC CCTGGCTGGT CACGCGCGAC GAAGTGCCCG ATCCGCAGGC CCTGCAGCTA
TGGCTGGATG TGAACGGGGA GCGCCGCCAG AGCGGCAGCA CGCGCACCAT GATCTTTGGC
TGCGCCGAAC TCATCAGCCA CTGCAGCCGC GTGATGACGC TGGAGCCGGG CGACCTCATC
ATCACCGGCA CGCCCCCGGG AGTCGGGATG GGCATGAAGC CGCCGCGCTA TCTGAAGGCT
GGCGATGTGA TGGAGCTGGG GATCGAGGGG CTGGGCGTGC AGAGGCAGCG AGTGGTGTAG
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| Protein sequence | MKLLRFGPEG QEKPGLLDAE GQIRDLSALL DDYTPRLLGR KALRALAAID PARLPLVQGP
VRIGMPWSGM SKFVAIGLNY RDHAEEAGMP IPKEPILFAK WPSCACGPDD DIPLPEGSTR
MDWEVELGIV IGERARNVSV ADALEHVAGY CLANDVSERE YQIDRSGGQW SKGKGFDRFG
PIGPWLVTRD EVPDPQALQL WLDVNGERRQ SGSTRTMIFG CAELISHCSR VMTLEPGDLI
ITGTPPGVGM GMKPPRYLKA GDVMELGIEG LGVQRQRVV
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