Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2265 |
Symbol | |
ID | 5747828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2491038 |
End bp | 2491598 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641297349 |
Product | membrane protein-like protein |
Protein accession | YP_001563290 |
Protein GI | 160897708 |
COG category | [S] Function unknown |
COG ID | [COG5395] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0953677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0891239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATTC CTGCAGCTCG CGGCGCCCCG ATGCATCTGG CACCCTGCCG GCGCCCGTCC GTCGCATGGC GCTGGCCCGG CCCGCGTCCG GCAGCGACAG TCCTGTCCCA TACAGGCCCG CCAACCCGGG CCGCACGCCA GGACACCGCC ATGCAAATGA CACCGCTGAT CGCCATCCAC ATGAGTGCCG CCCTCGCCGC CACGGCCACG GGTGCCATCG CCCTGCTGGC GCGCCGACGG GCCGCCGTCC ATCCCCGCCT GCACCGTGCG GCCGGCTACG CCTTCGTCAC GCTCATGGTC TGCGCGGCGG TGTCCGCCTG CTTCATCCGC GACTACCGCC TGCCCAACTG GGCCGGCTAC ACGCCCGTCC ACCTGCTGGT GCCGCTGACC TTTGCCGGCC TGGGCCGCTC GTTCTGGCAC CTGTACCACG GCAACATCGC CGGCCACCGC AAGATCATGC GCAGCGTCTA CATCGGCGCC TGCATCGTGG CGGGCCTGTT CACCCTGCTG CCCGGCCGCT ACCTGGGCGA CCTGCTGTGG CAGCAACTGG GCCTGGCCTG A
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Protein sequence | MEIPAARGAP MHLAPCRRPS VAWRWPGPRP AATVLSHTGP PTRAARQDTA MQMTPLIAIH MSAALAATAT GAIALLARRR AAVHPRLHRA AGYAFVTLMV CAAVSACFIR DYRLPNWAGY TPVHLLVPLT FAGLGRSFWH LYHGNIAGHR KIMRSVYIGA CIVAGLFTLL PGRYLGDLLW QQLGLA
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