Gene Daci_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2265 
Symbol 
ID5747828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2491038 
End bp2491598 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content71% 
IMG OID641297349 
Productmembrane protein-like protein 
Protein accessionYP_001563290 
Protein GI160897708 
COG category[S] Function unknown 
COG ID[COG5395] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0953677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0891239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTC CTGCAGCTCG CGGCGCCCCG ATGCATCTGG CACCCTGCCG GCGCCCGTCC 
GTCGCATGGC GCTGGCCCGG CCCGCGTCCG GCAGCGACAG TCCTGTCCCA TACAGGCCCG
CCAACCCGGG CCGCACGCCA GGACACCGCC ATGCAAATGA CACCGCTGAT CGCCATCCAC
ATGAGTGCCG CCCTCGCCGC CACGGCCACG GGTGCCATCG CCCTGCTGGC GCGCCGACGG
GCCGCCGTCC ATCCCCGCCT GCACCGTGCG GCCGGCTACG CCTTCGTCAC GCTCATGGTC
TGCGCGGCGG TGTCCGCCTG CTTCATCCGC GACTACCGCC TGCCCAACTG GGCCGGCTAC
ACGCCCGTCC ACCTGCTGGT GCCGCTGACC TTTGCCGGCC TGGGCCGCTC GTTCTGGCAC
CTGTACCACG GCAACATCGC CGGCCACCGC AAGATCATGC GCAGCGTCTA CATCGGCGCC
TGCATCGTGG CGGGCCTGTT CACCCTGCTG CCCGGCCGCT ACCTGGGCGA CCTGCTGTGG
CAGCAACTGG GCCTGGCCTG A
 
Protein sequence
MEIPAARGAP MHLAPCRRPS VAWRWPGPRP AATVLSHTGP PTRAARQDTA MQMTPLIAIH 
MSAALAATAT GAIALLARRR AAVHPRLHRA AGYAFVTLMV CAAVSACFIR DYRLPNWAGY
TPVHLLVPLT FAGLGRSFWH LYHGNIAGHR KIMRSVYIGA CIVAGLFTLL PGRYLGDLLW
QQLGLA