Gene Daci_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2097 
Symbol 
ID5747658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2301747 
End bp2302772 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content51% 
IMG OID641297179 
Productzonular occludens toxin 
Protein accessionYP_001563122 
Protein GI160897540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0561141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACTC TTATTACTGG CAATCCTGGT ACTGGTAAGA GTGCTGCCCT TGTGTCCATG 
CTCGAAGAGC TTGGTAAAGA TCGTCAGCTA TATGTGAATG GCATTCCTGA ATTGCTCATT
CCGCATATCG AATTGACAGA GCCTGAAAAA TGGCATGAAA CGGTTCCCGA TGGCTCCGTC
ATCATCATTG ATGAGGTTCA GCGGATATGG CGGCCTTCTG GTCCTGGCCA GAAGATACCT
GACATGATCG CGTTGCTTGA AACGCACCGC CATCGCGGTC TAGATTTCTA CATCATCACG
CAGGGGCCGA ATCTCATTCA TGCTAATGTG CGCGCGCTAA TCGGCCGGCA TGTGCATTTG
CGTGATCTTG GTATTCTTGG TCGCTGGTGG TATGAGTGGC CTGAGTGTGC AGATAATTGC
CGTACCGGCT GGAAAAATGC GCCGATTAAA AAGCGCTATA GGCTTCCAAA AAGCGTATTT
GGGAAGTACA AAAGCGCAAG TATTCACGTC AAACCCGTCA GGTCATTTCC GTGGATGCTT
GTTGTGATGA TTGCAGCGCT TTTGACAGTA TTTGTCATGT CCTGGTTTGC ATACAGGGCC
ATCAATGCCC GTCTGCATCC TGTGGCGCCA GAGCCGGTTT CTGTGACGCC TAATGCATCA
GTTCAGCCGT CCCGGCAGGA TATTCCAGTT AATACGGTCT CTTCGCCTGT CGTTGCTCCT
GATGAGCGCG TCGCATTTAT TCCTAGGCTT TCTGATCGGC CCTGGACTGC TCCTGCATAC
GATGAGATTC GGCGGGTTGT TGCTATGCCT TTGATCACTG GAGCGATGTG TATCAATGAC
CACTGCGTGT GTTTTAACGG TTCGCGTCGT TTGCTGGACG TTAGCAGTGA TGCATGTAAT
GAGTGGCGCA TCCAGCGGCC ATTTAATCCT TACGATGCGG AGCCTGTCCT CGTTGACGGC
GGTAGTTCTT CGGATCGTAC TGAATCGATC GAACGTCAAA GCGCTCCTGC TCACGGCGCG
TCTTGA
 
Protein sequence
MLTLITGNPG TGKSAALVSM LEELGKDRQL YVNGIPELLI PHIELTEPEK WHETVPDGSV 
IIIDEVQRIW RPSGPGQKIP DMIALLETHR HRGLDFYIIT QGPNLIHANV RALIGRHVHL
RDLGILGRWW YEWPECADNC RTGWKNAPIK KRYRLPKSVF GKYKSASIHV KPVRSFPWML
VVMIAALLTV FVMSWFAYRA INARLHPVAP EPVSVTPNAS VQPSRQDIPV NTVSSPVVAP
DERVAFIPRL SDRPWTAPAY DEIRRVVAMP LITGAMCIND HCVCFNGSRR LLDVSSDACN
EWRIQRPFNP YDAEPVLVDG GSSSDRTESI ERQSAPAHGA S