| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2090 |
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| Symbol | |
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| ID | 5747651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2293670 |
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| End bp | 2294446 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297172 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001563115 |
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| Protein GI | 160897533 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0577833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGG ACACCCCCAG CAACAAGGTG GCCCTCGTCA CGGGCGCCGC CAGCGGCATC
GGCCAGGCGC TGGCCGTGGC CTATGCGCAG GCAGGCATTG CCGTGGCCGG CAGCTACTAC
CCCCGGGATC CTCACGATCC CGGCCAGACC CTGGAACTCG TCGAACGCGC GGGCGGGCGG
TGCGTCATGG AGGCGGTCGA TGTGGGCGAT GCCGAACAGG TCGAGCACCT GGCCCGGGTC
GCCGTGGACC GCTTCGGCCG GCTGGACTTC GCCGTCGCCA ATGCGGGTTT GCTGCGCCAG
GCGGCCCTGA CCGAGATGAG CGATGCGCAG TGGCTGGAGG TCATCAACAT CGACCTGGGC
GGCGTGATGC GCACCTTCCG GGCCAGTGCG CGCCACATGG CTGCAGGCGG GGCCATGGTG
GCCGTCTCCT CCATTGCAGG TGGCGTCTAC GGCTGGGAGC AGCATGCCCA CTATGCAGCC
GCCAAGGCAG GCGTGCCCGG GCTGTGCCGC GCCGTGGCCA TGGAGCTGGC ACCGCGCGGC
ATACGCTGCA ATGCCGTGAT TCCGGGCCTG ATCGAGACGC CGCAATCGCT GGACCCGGTC
AACTCGCTGG GGCCGGAGGG GCTGGCGCAG GCGGCCAGGG GCATCCCGCT GGGACGCGTG
GGGCAGGCCC GCGAAATCGC CGCCCTGATC CGCTTCCTGA CCAGCGAGGA GGCCTCCTAC
ATCACCGGCC AATCCATCAT TGCCGACGGC GGCCTGACCG TGCGCTGGCC CAGTTGA
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| Protein sequence | MTPDTPSNKV ALVTGAASGI GQALAVAYAQ AGIAVAGSYY PRDPHDPGQT LELVERAGGR
CVMEAVDVGD AEQVEHLARV AVDRFGRLDF AVANAGLLRQ AALTEMSDAQ WLEVINIDLG
GVMRTFRASA RHMAAGGAMV AVSSIAGGVY GWEQHAHYAA AKAGVPGLCR AVAMELAPRG
IRCNAVIPGL IETPQSLDPV NSLGPEGLAQ AARGIPLGRV GQAREIAALI RFLTSEEASY
ITGQSIIADG GLTVRWPS
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