| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2089 |
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| Symbol | |
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| ID | 5747650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2292900 |
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| End bp | 2293658 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297171 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001563114 |
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| Protein GI | 160897532 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0605764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCT CCAAGCCCCT GGACGGCCGC CGCGCCGTCG TGACAGGCGC CGGCAGCGGC
ATCGGCGAGG CCATCGCCCT GGCCTATGCG CAGGCCGGCG CGCAGCTGTT GCTGGCCGAC
ATCGATGCCG CCCGCGCCGA CAGCGTGGCC CGGCGCTGCC GCGCGCTGGG CGCGCAGGCC
GAAACCGTGA TCGGCGACGT GGGCGACGAG TCCACGGCCC ACCGCATCGT CGACCGCTGC
GTGCAGGCCT TCGGCGGCAT CGACATCCTG GTGAACAACG CCGGCATGCT CACCCAGTCG
CGCTGCGCCG ACATGTCCAC CGCGATGTGG GACGAGATGC TGCGCGTGGA CCTGCGCAGC
GTCTTCCTGT GCGCGCGGCG CGCGGTGCCG CACATGCAGG CGCAGCGCTG GGGCCGCATC
ATCAACATCG CATCGCAGCT GGGCATCAAG GGCGGTGTGG AGCTGAGCCA CTATGCGGCG
GCCAAGGCCG GCGTGATCGG CTTCACCAAG TCGCTGGCGC TGGAAGTGGC ACCCGACAAC
GTCCTGGTCA ACGCCATTGC CCCCGGCCCC ATCGCCACGC CGCTGGTCGA TGGCATCAGC
GCGGACTGGA AGCGCGCCAA GGAGGCCAGC CTGCCGCTGG GCCGCTTCGG CCGCGCCGAC
GAAGTGGCGC CCACGGCGGT GCTGCTGGCC TCCGATCCCG GTGGCAATCT GTATGTGGGA
CAGACGCTGG GGCCCAATTC CGGCGATGTC ATGCCGTGA
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| Protein sequence | MNTSKPLDGR RAVVTGAGSG IGEAIALAYA QAGAQLLLAD IDAARADSVA RRCRALGAQA
ETVIGDVGDE STAHRIVDRC VQAFGGIDIL VNNAGMLTQS RCADMSTAMW DEMLRVDLRS
VFLCARRAVP HMQAQRWGRI INIASQLGIK GGVELSHYAA AKAGVIGFTK SLALEVAPDN
VLVNAIAPGP IATPLVDGIS ADWKRAKEAS LPLGRFGRAD EVAPTAVLLA SDPGGNLYVG
QTLGPNSGDV MP
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