| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2079 |
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| Symbol | |
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| ID | 5747640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2273980 |
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| End bp | 2275851 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297161 |
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| Product | ABC transporter related |
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| Protein accession | YP_001563104 |
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| Protein GI | 160897522 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.304897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAT ACCTTCTTCC CCGTCAGTTG GCCAAGGCCA CGGCGATGCC GTCGGGAACG
GAGACGGTGG GGGCTTTTGC ATCTGCCATC GCCGAGTCCT TCGACCGGGC TGCGCACCAG
CTGCGCCGGG CTGGCTGGCT GTCGCTGCCC ATCAGCCTGC TGGGACTGCT GCCGTCCATC
TTCCTGCTGC AGGTCTACAA CCGCGTCATT GCGCGTGGCG GCACCGCCAC CCTCACGGCC
ATGGTGGCGG GCGTGCTGTT CTTCCTGGGC GTGGAATGGT GGCTGCGGCG CAGGCGCGCC
CGCGCCCTGC GCGAAGCCGG CGCCATCATC GACCGCGACG TGTCCCAGGC GCTGATGCAC
TCCATGCTGC GCCACCCGCT GGCCGCGCTG GAGCAGCGCT CCTCCAGCCA GTGGCTGCAG
CTGTTCCGCG ACGTGAGCGC CATGCGCTCG GGCATGTCCG GGGGCCTGGC GACCTCGCTG
CTGGACCTGC CCATGGCCCT GCTGGCCCTG GTCGTCATCG GCATCATTGC CTGGCCCGTG
CTGCCGGTGA TCCTGGTGGC CATGCTCATC ATGTGCGCGC TGGCCTGGTG GTGGGCCGAC
GAGGTGCGCA GCGGCCGCGT GGAGGAAATC GCCCAGGCCC GCATGCTGGA CCGGGGCACG
GCCGAGATCT GCAATGCCCG CGCCACGCTC AAGGTGCTGG GCTACGACGC CGCCGCACGC
CAGAACTGGC AAAGCGGCTA TGACCGCTGG CTGGCCGAGA GCTTTGGCAA GAACGGCGAG
ATGGAGAACG CACGCGAGGC CAGCACCGTG CTGCTGACGC TGTTCTCCAT TGCCGTGATC
ACCGTGGGCG CCATTGCCAT CAATGCGCAG TGGATGAGCA TCGGCAGCCT GATGGCCGTG
AACCTGCTGT CGGGCAAGGC GCTGGGCCCC ATCTCGCAAC TGGCCAGCAA CTGGCGCTCG
CTGGCCCATG CCAACGAGGC CGCACGCCGC CTGCAGGCGG TGCTGGAGGA ACCCGTCGAG
GCCATGACCG ACACCGTGGA CCTGCCCCGG CCCCAGGGCC GGCTGCGCCT GGACCAGGCA
AGCTTCCACT ACCCGGGCGG CCATGTGGCG CTGGAGCAGG CATCGCTGGA GATCGGCCCC
GGCGGGCTGC ACGCCATCGT GGGGCGCAAC GGCGCCGGCA AGTCCACCCT GGCCAAGCTG
CTGGCCGGCC TCTACCAGCC CACGCAGGGG CGCATCTTCA TCGATGAATA CGACATGGCC
CAGTTCCCGC GCGCCGAACT GGGCCGCTGG ATAGGCTGCC TGGCCCAGCA GGTGTACTGG
TTCAGCGGCC CCATCGTGGA CGGGCTGCGC ATGGTCAACC CCGATGCCGA CGACCACAAG
ATCGTCACCG CCTGCCAGAT CTCGGGCGCG CACGGCTTCA TCAGCCGCCT GCCCCAGGGC
TACCAGACCG TGCTGGGCGA AGGCGGCGCG GGCCTGTCGG CCGGCGAGCT GCGCAAGCTG
GCCCTGGCCC AGCTGTTCCT GCGCAACCCC TCGGTACTGA TCCTGGACGA GCCCAGCAAC
GACCTGGACT TCGAGAGCGA AACCGCGCTG CTGCAGACGC TGCGGCAGAT TGCGCTCAAG
CACACGGTCA TCGTCGTCAC GCACTCGCTG CGCGTGGCCT CCATGGCCCA GCATCTCTAC
CATGTGCGCG GCGACGGCGG CATCGAGCAT GGCTCGCCCC AGCTGCTGCT GCCCCAGCTG
TTCGGCACGG CGCGCGAGCC TGCGGCTCCC GCAGCACCAG CAGCGTCCGC AACATCCGCA
GCCCCCGCAA CGCCGGCCGA CACGGCCCCG CATGCCGATC ACCCCGCCGT GGCGCAGGAG
CTTGCCTCAT GA
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| Protein sequence | MIRYLLPRQL AKATAMPSGT ETVGAFASAI AESFDRAAHQ LRRAGWLSLP ISLLGLLPSI
FLLQVYNRVI ARGGTATLTA MVAGVLFFLG VEWWLRRRRA RALREAGAII DRDVSQALMH
SMLRHPLAAL EQRSSSQWLQ LFRDVSAMRS GMSGGLATSL LDLPMALLAL VVIGIIAWPV
LPVILVAMLI MCALAWWWAD EVRSGRVEEI AQARMLDRGT AEICNARATL KVLGYDAAAR
QNWQSGYDRW LAESFGKNGE MENAREASTV LLTLFSIAVI TVGAIAINAQ WMSIGSLMAV
NLLSGKALGP ISQLASNWRS LAHANEAARR LQAVLEEPVE AMTDTVDLPR PQGRLRLDQA
SFHYPGGHVA LEQASLEIGP GGLHAIVGRN GAGKSTLAKL LAGLYQPTQG RIFIDEYDMA
QFPRAELGRW IGCLAQQVYW FSGPIVDGLR MVNPDADDHK IVTACQISGA HGFISRLPQG
YQTVLGEGGA GLSAGELRKL ALAQLFLRNP SVLILDEPSN DLDFESETAL LQTLRQIALK
HTVIVVTHSL RVASMAQHLY HVRGDGGIEH GSPQLLLPQL FGTAREPAAP AAPAASATSA
APATPADTAP HADHPAVAQE LAS
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