Gene Daci_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2076 
Symbol 
ID5747637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2270583 
End bp2270789 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content60% 
IMG OID641297158 
ProductFlp/Fap pilin component 
Protein accessionYP_001563101 
Protein GI160897519 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.554715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.612928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTTT GCAACCGAAA GGACGATGCC ATGACCGACA TCATCAAGAA CTTCTGGAAA 
GACGAAGAAG GCGCCACCGC CATCGAGTAC GGCTTGATCG CCGGCCTCAT CGCCGTGGGA
ATCGTGGTGG GCGCCACCGC GCTCGGCACC AACCTGAATG GGCTGTTCAC CCGGATCGCC
ACCAAGCTCA CCGGCTTCGT TCCCTGA
 
Protein sequence
MGFCNRKDDA MTDIIKNFWK DEEGATAIEY GLIAGLIAVG IVVGATALGT NLNGLFTRIA 
TKLTGFVP