Gene Daci_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2059 
Symbol 
ID5747620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2252301 
End bp2252996 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID641297141 
Producthypothetical protein 
Protein accessionYP_001563084 
Protein GI160897502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0548738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGC GTTGGATGAA GACGTCCAGG CCCATGGCAC GCTTGTTGCA ACAGGATGCA 
AAAAGCTTGT CGCAGTGTCT GGAAAACCGG GCACTGCGCC ACCCGCCCCA TCGATCGCCG
TCTTTCGGAG GAGAAACCAT GGCCGCTGTC TCGTTGTCGT TTGCAGGCGT GCCTCTGCCG
CGACTGCGCG CCCACCCGGA CAGGGCGCGC AGCAAGCCGT TGAACGTGCC CGCCTCGTTT
GCGTCTGCGG CGGTGCCGCG CGCTTCTGGC TTTGCCTCTG CGCGCGAGGC CGGTGATGGA
GGCGCGCATG CACAGATGGC GCCGGTGGCA ATGCTGACGC GCGTGAGCGA GGGCGTGCGC
ATCGTGCGGC GCAACGATGT GATCGCGGCC CAGGCCGGCG CCGTGCTGCA GCAGGGCGAC
CGCGTCATCG TGCCCCAGCA GGGCGGCGCG CAGGCCGTGT TCCAGGAGCA GGACGGGCAG
GCGCTGCTGG GCAGCTTCGC TGGTGGCACG GACGCCACGC TGGCGTATTT CAGCCGCAAG
GCGGATGCCT GCTCGGTGGT CTTTGACCTG GTGGCCGGCC ATGTGGACCT GGCGCTGTCG
GCCGTGGATG CCGGCGTGCT CGGCGGCGGG CCGTCCGGCC GGGGGCGCAG GGCGATCGGA
TTTCACTGCT ATTCACAACC CATTGCAGGC CGTTGA
 
Protein sequence
MDLRWMKTSR PMARLLQQDA KSLSQCLENR ALRHPPHRSP SFGGETMAAV SLSFAGVPLP 
RLRAHPDRAR SKPLNVPASF ASAAVPRASG FASAREAGDG GAHAQMAPVA MLTRVSEGVR
IVRRNDVIAA QAGAVLQQGD RVIVPQQGGA QAVFQEQDGQ ALLGSFAGGT DATLAYFSRK
ADACSVVFDL VAGHVDLALS AVDAGVLGGG PSGRGRRAIG FHCYSQPIAG R