Gene Daci_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2056 
Symbol 
ID5747617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2248532 
End bp2249191 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content71% 
IMG OID641297138 
Productputative secreted protein 
Protein accessionYP_001563081 
Protein GI160897499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAT TTGTTCTTTC CTCCGCCGTT CTGTGGCTGG GTTCCAGCGC ATTGAATGCG 
CATGCCGTGC CGCCCGGCGG CTTCGCCCCT GCAGGGCCTG GCGCGCCGCA CGCACAGGCC
GTGCTCGAAA GCGCCGTCGC CCGGCTGCTG ACCAATCCGT ATGGAGAGGT GGACGGCCTG
CGCCTGACCG ACGGCACGGT GGTCCGATTC CCGCCGCATA TGTCCGACGC GCTCACGGCA
GCCGTGAAGG TGGGCGACAC GGTGCGCATC ATCGGCCGCA GCGAAGCCGG TGGTGCGGTC
AAGGCGGATG CCATCGTGAA CTCGGCCAGC GGCCAGACCG TGTACGACCA ACCGCCCGCC
CGCGACGGCG CGCGCCCCAT GCCGCCGCAC CTGCGCATGG CCGGCCTGCA GACGCAGCAG
GCCCAGGGCC GCATTGACGT GGTCCTTACC GGCCCGCGCG GCGATGCCAA CGGCGTCATC
CTGTCCGACG GCGCCATCGT GCGCTTTGCC CCCCATGCGC TGCAGCAGCC GCTGCAGCAG
GGGCAGCTGT TTGCCGCCTC GGGCCTGGGC ACGCGCAACG CGCACGGCAC TTCGCTGGAG
GCCACCAGCA TGGGTGCCAG CCTGTCGGAC CTGCAGCCGC TGTACGACCG CGCGCGCTGA
 
Protein sequence
MSRFVLSSAV LWLGSSALNA HAVPPGGFAP AGPGAPHAQA VLESAVARLL TNPYGEVDGL 
RLTDGTVVRF PPHMSDALTA AVKVGDTVRI IGRSEAGGAV KADAIVNSAS GQTVYDQPPA
RDGARPMPPH LRMAGLQTQQ AQGRIDVVLT GPRGDANGVI LSDGAIVRFA PHALQQPLQQ
GQLFAASGLG TRNAHGTSLE ATSMGASLSD LQPLYDRAR