Gene Daci_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1894 
Symbol 
ID5747451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2096245 
End bp2097633 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content69% 
IMG OID641296972 
Producthypothetical protein 
Protein accessionYP_001562919 
Protein GI160897337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.557849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.511267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAT CCGCGTATTT CCCCCTGCGC CCCGCCAGCG CCTCGCTGCT GGCCGCGCTC 
GCCCTGGCCG GCTGCGGCGG CGGCTCGGCC GTGCTGCACG GGCCGGTCAC CTCCATCGAG
ACCGCTCCCA AGAGCACGGC CTGCCCCGCC GAGATTCCTG CGGGCGTCAG CTGCTGGGCC
GGGCAGGACT CCAAGGGCGC CTACTACCTG ATCGCCAAGC CCGCGCAGTG GAACGGCACC
CTGGTGCTGC ACGCCCACGG CGGCCCGGAC CTGGCCGCGC CCACCGCCGA CCGTGCGGCC
GAAGACCTGG TGCGCTGGTC CATCATGGTG CGCGCAGGCT ATGCCTGGGC CGGCTCCACC
TACCGCCAGG GCGGCGTGGA AGTGCGCGCC GCCGCCGAGG ACACCGAGCG CCTGCGCGGC
ATCTTCCGCC AGCATGTGGC CAAGCCACAG CGCACCATCC TGCACGGCCA GTCCTGGGGT
GCGGGCGTGG CGGCCAAGGG CGCGGAAATG TTCAACGAGC AGACCGTGGG CGAGCGCCCC
TACGACGGCG TGCTGCTGAC CAGCGGCGTG CTGGGCGGCG GCACCCATGC CTATGACTTC
CGCACCGATC TGCGCGTGGT CTACCAGTAC CTGTGCGGCA ACCACCCGCG CCCCAATGAG
CCGCAGTACG CGCTCAACCT GGGCCTGCCC GCAGATGCCA AGATGCGCCA GGCCGACGTG
GCCCTGCGCG TGAACGAATG CCTGGCGCTG GACAAGCCCG CCGCCCAGCG CACGGCCGCG
CAGCAGGCGA AGATCGACAC CATCACCAAG GTCATCAAGA TCCCCGAAAG CGCCATCCAG
TCGCACATGA ACTGGGGCAC CATGCACTTC CAGGACATCT CGGCCAAGCG CACGGGCGGC
GCCAGCCCCT TCGGCAACGA GGGTGCGGTC TATGCCGGCT CGGCCGACGA TGCCGCGCTC
AATGCCGGCG TGCTGCGCTA CCGCGCCGAC CCTGCGGCCT ACCGCAAGTT CGCCGATGAC
ACCGACCCCG TGGGCAGGAT TGGCGTGCCG GTCCTCTCGG CCAAGTGGAT CAGCGACCCT
ACGGCCTTCG TGGAGCTGGA TGCGCGGTTT CGTGCGGTGA TGCAGCAGGG CGGCAGCGGG
GACCGGCTGG TGCAGACCTT CACGCGGCAG GGGACGCACA GCTATATCAG CGATGCGACC
TATCCCACCT TGATGACTGC GTTGATGCAG TGGGTGGAGG CGGGGGTGAA GCCGACTGCT
GCGGGGATTG CTGCTGCTTG TGTGGGGAAT GAGGCCAAGT TTGGGGTGGG GTGCAGTTTT
GATGCGGCTT ATGTGCCGGC TGCGTTGGGG GCTCGGGTGC CTGAGAGGGC GCGGCCTTCT
TTGCAGTGA
 
Protein sequence
MQASAYFPLR PASASLLAAL ALAGCGGGSA VLHGPVTSIE TAPKSTACPA EIPAGVSCWA 
GQDSKGAYYL IAKPAQWNGT LVLHAHGGPD LAAPTADRAA EDLVRWSIMV RAGYAWAGST
YRQGGVEVRA AAEDTERLRG IFRQHVAKPQ RTILHGQSWG AGVAAKGAEM FNEQTVGERP
YDGVLLTSGV LGGGTHAYDF RTDLRVVYQY LCGNHPRPNE PQYALNLGLP ADAKMRQADV
ALRVNECLAL DKPAAQRTAA QQAKIDTITK VIKIPESAIQ SHMNWGTMHF QDISAKRTGG
ASPFGNEGAV YAGSADDAAL NAGVLRYRAD PAAYRKFADD TDPVGRIGVP VLSAKWISDP
TAFVELDARF RAVMQQGGSG DRLVQTFTRQ GTHSYISDAT YPTLMTALMQ WVEAGVKPTA
AGIAAACVGN EAKFGVGCSF DAAYVPAALG ARVPERARPS LQ