Gene Daci_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1869 
Symbol 
ID5747426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2067111 
End bp2067389 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content66% 
IMG OID641296947 
Productmuconolactone delta-isomerase 
Protein accessionYP_001562894 
Protein GI160897312 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4829] Muconolactone delta-isomerase 
TIGRFAM ID[TIGR03221] muconolactone delta-isomerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTATC TGGTCCGCAT GGACGTGAAG ATCCCCCACG ACCTGCCCGC CGACGTGGCA 
GCCGAGATCA AGGCCCGCGA GAAGGCCTAT TCCCAGCAGC TGCAGCACGA CGGCCGCTGG
CCCCACATCT GGCGCGTGGT GGGCGAGTAC GCCAACTACA GCGTGTTCGA CGTGGCCTCC
AACGACGAGC TGCACGAGCT GCTGCAGGGC CTGCCGCTGT TCCCCTACAT GGACATCCAG
GTCACGCCGC TGGCAAGGCA TCCCTCGGCC ATCGCCTGA
 
Protein sequence
MLYLVRMDVK IPHDLPADVA AEIKAREKAY SQQLQHDGRW PHIWRVVGEY ANYSVFDVAS 
NDELHELLQG LPLFPYMDIQ VTPLARHPSA IA