Gene Daci_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1797 
Symbol 
ID5747355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1995480 
End bp1995878 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content71% 
IMG OID641296877 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001562824 
Protein GI160897242 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.425659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG CCAAGAACCC CGCCTCGACC TGGTCCACGC TGTGCGTGGT GGCCACCACC 
GTCCCCAGCG CCGAGGAGGC TGCCCATCTG GCGCGCAGCC TGGTGCAGCA GCAGGCCGCG
GCCTGCGTGC AGGTGGAGCC CATCACCTCG CACTACGTGT GGGAGGGCGA GATGCACGCC
ACGCCCGAGT GGCGTCTGGT CTGCAAGACC CTGCCCGACG TGCTGGAGCG CCTGGCCCGG
CTGCTGCGCG CCGGGCACAG CTACAGCGTG CCGCAGATCA CCATGCGCAC CGAGCGCTGC
ATGGCCGACT ATGCGCAGTG GCTGCGCTCC CAGGTCTCGA CCCGGGACGT GGCGGACACT
GCAGAAATGG CCGCCGCGCC CCGCATCACT GCGGCGTGA
 
Protein sequence
MTSAKNPAST WSTLCVVATT VPSAEEAAHL ARSLVQQQAA ACVQVEPITS HYVWEGEMHA 
TPEWRLVCKT LPDVLERLAR LLRAGHSYSV PQITMRTERC MADYAQWLRS QVSTRDVADT
AEMAAAPRIT AA