Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1782 |
Symbol | |
ID | 5747340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1982112 |
End bp | 1982918 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641296862 |
Product | NLPA lipoprotein |
Protein accession | YP_001562809 |
Protein GI | 160897227 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.833269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTT CCCGTGCCCT GATCGCCCCG CTGGCCGCCC TGGCCCTGTT CTCCGCCCAT GCTGCCGACA AGCTGCGCAT CGGCGTGGTG CCCGGCGCCT ACGCCGACTC GGTGGCCGTG GCCGCCAAGG AGGCCAAGGC CCAGGGCATC GATGTGCAGG TGGTGGAGTT CACCGACTGG ACCACGCCCA ACGTGGCCGT GGACTCGGGC GACCTGGACA TCAACTACTT CCAGCACCAG CCCTTCCTGG ACAACGCCAT CCAGAAGAAC GGCTACAAGC TGGCCAGCGC GGGCACGGGC ATCCTGGCCA ACGTGGGCCT GTACTCGCTC AAGCACAAGT CCATCGCCCA GGTGCCGCAG GGCGGCAAGG TGGGTATTGC CAACGACCCC GTGAACCAGG GGCGCGGCCT GCTCTTGCTG CAGAAGGTGG GGCTGATCAA GCTCAAGCCC GGCGTGGGCT ACCTGGGCAG CCTGGACGAC ATCGTCGAGA ACCCCAAGAA GCTCAGCTTC GTCGAGGTCG AGGGGCCGCA GCTGGTGCGC ATCACGGGCG ACGTGGACAT CGCCCAGGGC TACCCGCACT TCATCGTGGC GGCCAAGGCC TTCGATCCGT CCAGCGGGCT TGCGTATTCG GGCATCGAGG ATGCGCGCTT TTCCATCCAG TTCGTGGTCA AGGCCAGCCG CACGCAGGAC CCCGTGGTGC AGAAGTTCAT CCGCATCTAC CAGAACTCCG ATGCGGTGAA GGCCGAGGCC CAGCGCGCCT TCTCCAACGA CAAGCGCCTG TACAACCTGG CCTGGGTCAA GCCCTGA
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Protein sequence | MKLSRALIAP LAALALFSAH AADKLRIGVV PGAYADSVAV AAKEAKAQGI DVQVVEFTDW TTPNVAVDSG DLDINYFQHQ PFLDNAIQKN GYKLASAGTG ILANVGLYSL KHKSIAQVPQ GGKVGIANDP VNQGRGLLLL QKVGLIKLKP GVGYLGSLDD IVENPKKLSF VEVEGPQLVR ITGDVDIAQG YPHFIVAAKA FDPSSGLAYS GIEDARFSIQ FVVKASRTQD PVVQKFIRIY QNSDAVKAEA QRAFSNDKRL YNLAWVKP
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