| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1773 |
|---|
| Symbol | |
|---|
| ID | 5747331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1971820 |
|---|
| End bp | 1973001 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641296853 |
|---|
| Product | acyl-CoA dehydrogenase type 2 |
|---|
| Protein accession | YP_001562800 |
|---|
| Protein GI | 160897218 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGG CAGAGGCCGT CCCTGCGGAC CCGATAGCCA CTGCGCAGGA TCTGGCGCAG
CGCCTTGCCG CCACGGCGGC CCGGCGCGAT GCCGCAGGCG GCACGCCCAA GGCCGAGCGC
GATGCGCTGC GCGCCAGCGG CCTGCTGGCA CTGAGCATTC CGCGCGAGCT GGGCGGCCTG
GGCGCGGACT GGGTGCAGAC GCTGGAGACG GTGCGCATCC TGGCCACGGC AGACGGCTCG
CTGGCCCATG TCTACGGCTT CCAGCACCTG CACCTGGCCA CCGTGCAGCT GTTCGGCCAG
CCCGCCCAGT GGCGGCCCTG GCTGCTGCAG ACGGCACGCC ACCGCTGGTT CTGGGGCAAT
ACGCTGAACC CTCTGGACCG CCGCACCACG GCCACGCGCC AGCCCGGCCA CTGGGAGTTC
TCGGGCAAGA AGAGCTTCAC CTCGGGCGCG CTGGACTCGC AGATGCTGGT GGCCTCGGCC
ATCGATGCCG ACAGCGGCCA GCTGCTGATC GGCGTGGTGC CCACGGAGCG CACGGGCATC
ACCTTGCTGC GCGACTGGGA CAACATGGGC CAGCGCCAGA CCGACAGCGG CTCGGCCCTG
TTCGAGCGCG TGCGCGTGGA GGCGGCCGAG CTGCTGCTGG ACCCCGGCCC GCTGTCCACG
CCGCATGCCG CGCTGCGCCC GCTGCTGGCC CAGCTCATCC TGGCCCATCT GTTCCTGGGC
ATTGCCCAGG GCGCGCTGGA GCAGGCGCGC GGCTACACGC TGAACGAGGC GCGGCCCTGG
TTCAAGTCCC CTGCCGATGC GGCCGGCGCA GACCCCCACA TCCAGGCGCT GTATGGCGAG
CTGTGGGCCG CGCTGGAAGG CGCGCGCCTG CTGACCCTGC AGGCCGCGCA GCGCTTTGAC
GCCGCCTGGC GCCGGGGCCC GGCGCTGACC GCCCACGAGC GCGGCGAAGT CGCCGTGGCC
GTGACGGCCG CCAAGATTGC CACCACGCGC TCGGGGCTGG ACCTGTCCAG CCGCATCTTC
GAGGCCACGG GCGCGCGCGC CACGCACGCG GCGCTGCGCT TTGACCGCTT CTGGCGCAAC
CTGCGCACGC AGACGCTGCA CGACCCGCTG CACTACAAGC TGCAGGAGCT GGGCGACTGG
GTGCTCAACG GAACCCATCC GCAGCCCAGC TTCTACTCGT GA
|
|---|
| Protein sequence | MSQAEAVPAD PIATAQDLAQ RLAATAARRD AAGGTPKAER DALRASGLLA LSIPRELGGL
GADWVQTLET VRILATADGS LAHVYGFQHL HLATVQLFGQ PAQWRPWLLQ TARHRWFWGN
TLNPLDRRTT ATRQPGHWEF SGKKSFTSGA LDSQMLVASA IDADSGQLLI GVVPTERTGI
TLLRDWDNMG QRQTDSGSAL FERVRVEAAE LLLDPGPLST PHAALRPLLA QLILAHLFLG
IAQGALEQAR GYTLNEARPW FKSPADAAGA DPHIQALYGE LWAALEGARL LTLQAAQRFD
AAWRRGPALT AHERGEVAVA VTAAKIATTR SGLDLSSRIF EATGARATHA ALRFDRFWRN
LRTQTLHDPL HYKLQELGDW VLNGTHPQPS FYS
|
|---|
| |