Gene Daci_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1756 
Symbol 
ID5747314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1952247 
End bp1953035 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID641296836 
ProductIclR family transcriptional regulator 
Protein accessionYP_001562783 
Protein GI160897201 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.439006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA GGCGATCCCC CATCCTCCAT GACAAGCCGG GACAGTCCCC GAGCAACCGC 
TCCCTGGAAA GAGGCGTCGA AATACTCCGT GCGTTCAGGC CCGGCTCGGA ACTGCTGGGC
AACAGCGACC TGGCGGAACG CACCGGCCTG TCCAAGGCCA CGGTCACCCG GCTGACGCAG
ACCCTGGTGG GCTGCGGCAT GCTGCAGGCC GACCACCCGA GCCGGGCCTT TCGCCTGGCC
CCGGCGGTCC TGAGCCTGGC GCACGCCATG CGCACGGGCT CGACGGTGCT GTCGATTGCG
GCGCCCCTGA TGCGCACACT CGCCGAGACA CGCAGGATCA ACGTGGGCCT GGCATGTCCC
GACAGGGACG AGATGGTCTA CCTGGAATCC ATCCGCTACA ACCGCCGGAT CGTGCTCAGG
CATGTGGTCT CGGGCCAGCG CGTTCCCATG GAACTGACAT CACTGGGGCG CGCCTACCTG
GCAGCGGCGC CATCGGCCAG GCGCAAGGCC TTGCTCGACA GCTTCAGGCT CAAGAGGGGC
GCCCAATGGC CTGCGCTGGA GCAGCAGATC CAGGCGGCGA TCAAGTCCGT GAAAAGCCAA
GGCTTCTGCG CCGCATCGTG GCAGCCGGAA GTGGTTGCGC TGGCCACGCC GCTGGTGACA
CCCGATGCCA TCTATGTACT GAACTGCAGC GTCTCCACCA CGGAGCCTTT GCCGACCATC
GTGCAGGAGC TGCACCCGGC CTTGCTGCAA CTGGGCCGGC AGATTGAAAG CCTGCTGGAA
AAACTGTAA
 
Protein sequence
MTNRRSPILH DKPGQSPSNR SLERGVEILR AFRPGSELLG NSDLAERTGL SKATVTRLTQ 
TLVGCGMLQA DHPSRAFRLA PAVLSLAHAM RTGSTVLSIA APLMRTLAET RRINVGLACP
DRDEMVYLES IRYNRRIVLR HVVSGQRVPM ELTSLGRAYL AAAPSARRKA LLDSFRLKRG
AQWPALEQQI QAAIKSVKSQ GFCAASWQPE VVALATPLVT PDAIYVLNCS VSTTEPLPTI
VQELHPALLQ LGRQIESLLE KL