| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1755 |
|---|
| Symbol | |
|---|
| ID | 5747313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1949763 |
|---|
| End bp | 1951898 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641296835 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001562782 |
|---|
| Protein GI | 160897200 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.394567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCG ACATCGCCGT TGGAAAATAC ATCGCCACCC TGCGCGAGCA GGCGAGACTG
AAGCAAGCCG AACTCGCACG CAAGCTCACC TGGAGCCCCG CCGTACTGTC CCGCGTCGAG
AGCGGTGAGC GCACGCTCGG CGGCGACGAG CTGGCTACGA TCCTCAACGG CATCGGCACT
CCCGAAGCTC TCAAACTACA GGAAATGCTC GCCCGTGAAT GGAAGATCCT TTCTGAACCT
CCGCTCGGCG ACCCGGATGC CGACCTCCTA TGGAGCGCTG AGCAGACGGC CCAACAGGTT
CATGACCTGG CCGAGCGGCC GGACGTCAAG CAGTTCTTCG AGCGCCGCCT GGTACGTTAT
CAGGACGAGC TGAAAACAGC CGCCGCGCGC GTGGCCGACA AACGCTTCCG CGCCGCCTTC
ATCGGCACCA TCGCCGTCGG CAAGTCGACA GCAATCTGCA GTGCGCAGGG CCTCGAGATT
TCGACGGGAA AGGGCTTGCC AAAAGCGGTG CTTGAGACCG GCACCGGGCG CATCACGCTT
TGCGAGGTTC ACGTCCGGCA GGGTCCAGGC TACGGCCTGA TGGTCGAGCC CTGCAGCGAT
GACGAAATCC GCCGCCACGT TTCTGACTTT GCGAGTTTCC TGCTCCGACC GACGCAACCG
GTGCCGCAGG ATGACGACGA AAGTGAATCC GCTTCACCTG GCGTGTCCGG CGAGATTGAG
CGCGCCATCC GCAATATGGC AGGCCTGCGC CGCCGCCGAG CGGAGCGGAA GCAGGACGGC
ACGGTCGTGC CCGCCAGCGA CGAAGCCCGG GCGCTGGCAG CAACGCTGAC AGACTCGAAG
GCGCTCGCGG TCGAAATCCT CTCGCGCATG GAGCTGCACC GGCGCGCAGA GCGCGATATG
TGGCACAGCG CCGACAGCGG CACAAACCCG CTGGAGTGGC TACAGGACGC GTTCGAGCGC
ATCAACAACG GCCGCCACTC GGATTTCACG CTGCCCCGGC GCATTGAACT ATTCGTACCG
CAGACCATCC TGCAGGAGAG TGAGGTCGAT CTCACTCTGA TCGACACGCG CGGCATCGAT
GAGTTGGCGG AGCGTCGCGA CCTTGAGCAG CACTTTGACG ACCCGCATAC AGTCGTCGTG
CTGTGCAGCC GGTTCGATGA AACCCCAGCT CTGCCGGTCC GGCAGCTGCT GACGCGCGCT
AGGGAGGCCG GGGTACGCAC CCTGGAGAGC CACGCAGCGA TCCTGGCGCT GCCGCGGCCG
GGCGAGGCGA CGATGGTCAA GGAAAACGGC GTCTTGGTCC AGGACGCGGC GGAAGGTCGC
GAGGTCAAGG GCTTCGAGGC TGCAGATCGT CTCCAGCAAC TCGGCGTTGG CACAATACCG
ATCGAGTTCT TCAACGCATC GGAGGATGAC CCGGAGGATC TACGCAGCTT CGTCTGCAGG
CGTATCCGCG TAGTCCGGCA GTGGCAGCGC GACGCCTTGG AGGAGATCAT TTCGGGAGCG
CAGGCGCTGC TAGAAAACCA TGAACGGGCC CAGGCCCGCG AGGCGATGCA GGCCGCAGCG
CGCAGACTGC AAACTTGGCT CGAAAACAAT GCCGCGCTGC CCAAGAGCAC AACGCGGCAC
GTGCATGACA GCCTCGTCAA GGCGGTCGAG GCCGCCCATC CGCGGACGGT CTACGCTGCC
ATCGTGCGCG ACGGGGATTG GTTGAACCTG CACTACGGGC ATCAATTGAG TCACGGCGCA
CGCCGGCTCG CCGCAATTCT CACAGAGCCG AAGCTAAACG AGTTTCGGGC GATTGCGAAC
AACCTGCTCC AGGACGATCA GTTCGCCGAC GCACACGGCC TCGTGCATCA GACCATCAGG
TCCGTGGAGG CCGGCTTTGA CGCAGTGATC CGCAAGGCCC AACTGGTCGG CGAAAGTGTG
CACGCCGACG AGATGCGAGG GGACTCCGAC TTCTGGCGCG ATTGCAGCAG CCAGTGGGGT
CTGGGGAAAG GCTATCGGGA GCGAATCAAT GTGCGCAATC ATGACTGGTT TTGCGTCAAG
CACGATGGCG AGGCGGATGC GCGAGTGCTG GCCGCGGTTA CAGAGGCCTG GGACGACGCG
ATGGCATCGG TGCGCCATCT GCTGATCCAA GGCTGA
|
|---|
| Protein sequence | MTRDIAVGKY IATLREQARL KQAELARKLT WSPAVLSRVE SGERTLGGDE LATILNGIGT
PEALKLQEML AREWKILSEP PLGDPDADLL WSAEQTAQQV HDLAERPDVK QFFERRLVRY
QDELKTAAAR VADKRFRAAF IGTIAVGKST AICSAQGLEI STGKGLPKAV LETGTGRITL
CEVHVRQGPG YGLMVEPCSD DEIRRHVSDF ASFLLRPTQP VPQDDDESES ASPGVSGEIE
RAIRNMAGLR RRRAERKQDG TVVPASDEAR ALAATLTDSK ALAVEILSRM ELHRRAERDM
WHSADSGTNP LEWLQDAFER INNGRHSDFT LPRRIELFVP QTILQESEVD LTLIDTRGID
ELAERRDLEQ HFDDPHTVVV LCSRFDETPA LPVRQLLTRA REAGVRTLES HAAILALPRP
GEATMVKENG VLVQDAAEGR EVKGFEAADR LQQLGVGTIP IEFFNASEDD PEDLRSFVCR
RIRVVRQWQR DALEEIISGA QALLENHERA QAREAMQAAA RRLQTWLENN AALPKSTTRH
VHDSLVKAVE AAHPRTVYAA IVRDGDWLNL HYGHQLSHGA RRLAAILTEP KLNEFRAIAN
NLLQDDQFAD AHGLVHQTIR SVEAGFDAVI RKAQLVGESV HADEMRGDSD FWRDCSSQWG
LGKGYRERIN VRNHDWFCVK HDGEADARVL AAVTEAWDDA MASVRHLLIQ G
|
|---|
| |