Gene Daci_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1700 
Symbol 
ID5747258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1890487 
End bp1890957 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content55% 
IMG OID641296781 
ProductXRE family transcriptional regulator 
Protein accessionYP_001562728 
Protein GI160897146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGA AGATATCAAA CATAAGAGAT GGGGTAGCTA CAAGACTGCG TGAAGCACGA 
GAACTTTTAG GCCTCAAACA AGCGGAGCTC GCAACCCTGA CGGCCATCAG CCGCTCAACG
CAGATTGCCT ACGAAAAAGG CACTACAGAG CCCACAACTG GATACTTACA AGCAGCGCAG
CGGGCTGGAC TCGACATCGA CGCAGTTCTG TTTGGACCGA GGGAAGAGAT TGATCATGCG
GCTCCTCCCC CAGCGCGCGG ACAACCTGAC TGGGTACTCA TCCAAGAGTG CTGCGACACA
GTGGACTTCT TCTGTCTACG CTTTGCGCCG ACCTGTCCGG CCAGCTATCG CTGGAAGCTG
ATCAGGCAGC TGTATGAGGC GCTTTCTGCT GCACTCTTGC AGGAGCCAGA AGCACCACAA
CCACCGTCTT TAGAGGTACT TAGCAAGCTG TGGGCCGACT ATGGAAAGTG A
 
Protein sequence
MKSKISNIRD GVATRLREAR ELLGLKQAEL ATLTAISRST QIAYEKGTTE PTTGYLQAAQ 
RAGLDIDAVL FGPREEIDHA APPPARGQPD WVLIQECCDT VDFFCLRFAP TCPASYRWKL
IRQLYEALSA ALLQEPEAPQ PPSLEVLSKL WADYGK