Gene Daci_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1688 
Symbol 
ID5747246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1877324 
End bp1878055 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID641296769 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001562716 
Protein GI160897134 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGT CGTCCTCCAC GCCTTCAGCG GTTCGCTGCA GCGAATGCAT GCGTTCGTCC 
CATTGCCTGC TGGGCCAGTT GCCCGAGCCC GCATTCCAGC AATGGCTGCC GCACATCCGC
GAACGCGGCC TGGCCAAGGG CCAGAAGCTC CAGGCGCAGG GCTGCGTCGC CCATGAATTC
CAGGTGATCA AGATCGGCTT CGTCCTGGCC ATCCGCCGTG GCGGCGACGG CGTGCAGCGG
CCCGTGGCGC TGTTCGGCAA CGGCCACGCG CTGGGCAGCC CGGGCTGGCT GCAGCAGCCC
TCGGCCATGC ACTTCGAGGC ACTGGGCCCG GGGCGCATCT GCTGCGTGGA CATCGCCACC
ATCACGCGCC GCGGCCTGGT CGATGCCGCC TTCGTGCGCG CGCTGGCCAC CAGCTACACC
TGCAACAACG CCCTGCTGGC GGAATGGGCC TACATCGTCC GCATCCCCGG CGTGCTGCGC
CAGCTGGCCG CCACCCTGAT GCAACTGGCG GCTCTGCAGT CAAGCCTGCT CGTGCGCCTG
CCCAGCCAGG GCGCCCTGGC CGCCCTGCTG GCCACCACGC GCGAAACCAT CGCGCGCAGC
CTTGTGCGCC TGGTGCAGCT CGGCGCGCTG GAGCGGCCGG ATCGATGGCA TTGCGTGCTG
CAGCCTGCGG TGTTGTTGAG GATCAGTGGG GGTGGGGTGA AGGATTTGGA GTACCAGGGG
ATGGGAGGCT GA
 
Protein sequence
MPSSSSTPSA VRCSECMRSS HCLLGQLPEP AFQQWLPHIR ERGLAKGQKL QAQGCVAHEF 
QVIKIGFVLA IRRGGDGVQR PVALFGNGHA LGSPGWLQQP SAMHFEALGP GRICCVDIAT
ITRRGLVDAA FVRALATSYT CNNALLAEWA YIVRIPGVLR QLAATLMQLA ALQSSLLVRL
PSQGALAALL ATTRETIARS LVRLVQLGAL ERPDRWHCVL QPAVLLRISG GGVKDLEYQG
MGG