Gene Daci_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1683 
Symbol 
ID5747241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1872551 
End bp1873165 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID641296764 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_001562711 
Protein GI160897129 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC GGACAGCGCT GCGCGTTCTG GGCTTGACCG CCATGGCATG GGGCGCCCTG 
GCGCTGAGCG GATGCTCGCG CGAGGCAAAG ACCAGTTTCC AGGGTGTCGA TGTCACGGGC
GCCGAATACG CCAAGGACAT TCCCCTGCGC GATGTGGACG GCAAGCAGCG CAGCATCAAG
GACTTTGCGG GCAAGGTCGT CGTGGTCTTC TTCGGCTACA CGCAATGCCC CGATGTCTGC
CCCACCACCC TGCAGGAGCT GGTCGAGGTC AAGCAGCAGC TGGGCGCCGA CGGCGACAGG
CTGCAGGGCG TCTTCGTCAC CCTGGACCCC GAGCGCGACA CGCCCGAGGT GCTCAAGGCC
TACCTGGGCA ACTTCGACCC CGGCTTCGTC GGTCTGCACG GCACGCCGGA CGAGACGGCG
GCCGTGGCCA AGGACTTCAA GCTCTTCTAC AAGAAAGTGC CCGGCAAGAC CGAAGGCGCC
TACACGCTGG ACCATTCGGC CGGCAGCTAT GTCTATGACA CGGCCGGCCG CCTGCGCGTG
TATGAGCGAT ACGGCGGCGG CCCGCAGGTG CTGGGCGCCG ACGTCAAGGC CCTGCTGCAG
GAAAAACGCT CCTGA
 
Protein sequence
MNKRTALRVL GLTAMAWGAL ALSGCSREAK TSFQGVDVTG AEYAKDIPLR DVDGKQRSIK 
DFAGKVVVVF FGYTQCPDVC PTTLQELVEV KQQLGADGDR LQGVFVTLDP ERDTPEVLKA
YLGNFDPGFV GLHGTPDETA AVAKDFKLFY KKVPGKTEGA YTLDHSAGSY VYDTAGRLRV
YERYGGGPQV LGADVKALLQ EKRS