Gene Daci_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1607 
Symbol 
ID5747164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1803977 
End bp1804657 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID641296688 
Producthypothetical protein 
Protein accessionYP_001562636 
Protein GI160897054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.887716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACG CTGCCGCGAA ACCATCGCGC AAGAAGATCG CCAAGGCGGA CCGCGCGCTG 
TTCCTGCAGG CCGCTGAAGC ACTCAAGCAG GCCGCGATGA CCGACGAGAC GCACCGGCAC
AGCGGGGAAT CCGACCGTCT GCTGCGCATT GCCAGCGATG TGGCACGCCA CGCGGCCCAG
CCCGGCTCGA CGTGCGATCT GCAGAACACG GCGTTTGATG TGGCCGCCTG CATCAATTCG
GCGCGGCTGG TGCCCGGCGA TGCGGAGTCC GCCCCACGCA CTCGCCTGCT GGCAGAAGCG
GCCCAGGCGC TGGCGCAGAT ATCAGAGACG CCGGTGGACG GGATCGTGTT TCCGCGCACC
ACGCTGCACG AATTGCAAGC CAGGCTGGAC ACCGGCGCAA CGCCATCGCA GTGGCGCGAA
CTGGCCCGCG AGGCCAACTA CGAGGTCCAG CAGTTGGCGC AGGTGCTGAT GCAAATGGGC
GACCACCAGA ACACGGAGAG CCATATCGTG GCGCACGGCA TGGCGGCACG CATCTCGCAG
TTGTCGGAGA TCGTTTACGT GGCGGCCGCC CTGCATGGGG AGCATCGCGA TGAATGGGGT
TCGCAGACCC TTCGTGACGT GCGCGATGTC TTTGAAGGCG GCATGGGCCG CATCTGCGGC
GATCCCCCGG ACGGCGCATG A
 
Protein sequence
MKHAAAKPSR KKIAKADRAL FLQAAEALKQ AAMTDETHRH SGESDRLLRI ASDVARHAAQ 
PGSTCDLQNT AFDVAACINS ARLVPGDAES APRTRLLAEA AQALAQISET PVDGIVFPRT
TLHELQARLD TGATPSQWRE LAREANYEVQ QLAQVLMQMG DHQNTESHIV AHGMAARISQ
LSEIVYVAAA LHGEHRDEWG SQTLRDVRDV FEGGMGRICG DPPDGA