| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1527 |
|---|
| Symbol | |
|---|
| ID | 5747083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1713958 |
|---|
| End bp | 1715043 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641296607 |
|---|
| Product | periplasmic lipoprotein-like protein |
|---|
| Protein accession | YP_001562556 |
|---|
| Protein GI | 160896974 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3489] Predicted periplasmic lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0309667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACA TGCGCATGAC CCCTCGCCAA ATCCTTTGTG CCGCCGCGCT GGCGCTGCTG
GCCGCCGCCC CTGTCCATGC CCAGGAAGTG GATGCCAACA TGGCCATTCC CTTCTACAAC
ACGGCCCACG CCGTGCAGGG GCTGTACGGC CAATGGTTCT CGCCCCAGGC CAAGGCCGCG
CAGGCATCCG CCCAGGCGCT GAGCCAGGCG CTGCGCGCGC ACTGCACGGC ACCTGCGGGA
TCGGCTGCCG CCACGCTGCA GACGGCGCGC CAGGCCTATG TGCAATCGTC GCGACAGTGG
AGCAGCCTCT CGGCCGTGGC CCTGGGGCCG CTGGTGGAGC GCCGCTCGGC ACGTCTGGTG
GACTTCCGCC CCATGCGCCC GGCCCTGCTC AAGAAGGCCA TACAGTCGGC CCCCGCCGAT
CTGGCTGCCA TGGAGCGCAT CGGCGCACCC GCCAAGGGAT ACCCGGCGCT CGAGAACCTG
CTGTGGACCC AGCCCGTGGA GCCGCAGACG CCGGCCTGCG CCTATGCCAC CCTGGTGGCG
GAGGAAATCG GCGCCGAGAT GGGCATCCTC AGCAACGGCT TTGCCAAGCT CGCGGCCCAG
GATTGGTCCG AGGACGGCGA TGCCACCACC GAAGCCATGG CCGAGTTCAT CAACCAGTGG
GTGGGCGGCC TGGAGCGCCT GCGCTGGGCG GACATGGAAA AGCCTTTGCG CAGTGCGGGC
AGTGCGGGCA GCAAACCGCC CGCCTGGGAG CATCTCGCCA GCGGCAGCAC GCTGGAGATC
TGGCGCGCGC ACTGGCAGGG CCTGCGCACG CTGGCCGTGA GCGTGGACCG CAAGGTGCCC
CAGCCCGGCG TGGACATCGT GCCCATCGAG TCCTACCTGC GCGGCCGTGG CCTCAACCCG
CTGGCCGACC GCTGGCTCAA GGCCGTCAAC GAGGCCGATG CCGGCATGCG CGCCCTGACC
GAGCCGAGCG CCAAGGCCGT CGATGCCGCC ACCAAGCCGC TGTCGCGCCT CAAGCGCCTC
ATGGAAGGCG AGGTGGCGCC TGCGCTGGAA GTCAACATCG GGTTCTCGGA TGCCGACGGG
GATTGA
|
|---|
| Protein sequence | MQDMRMTPRQ ILCAAALALL AAAPVHAQEV DANMAIPFYN TAHAVQGLYG QWFSPQAKAA
QASAQALSQA LRAHCTAPAG SAAATLQTAR QAYVQSSRQW SSLSAVALGP LVERRSARLV
DFRPMRPALL KKAIQSAPAD LAAMERIGAP AKGYPALENL LWTQPVEPQT PACAYATLVA
EEIGAEMGIL SNGFAKLAAQ DWSEDGDATT EAMAEFINQW VGGLERLRWA DMEKPLRSAG
SAGSKPPAWE HLASGSTLEI WRAHWQGLRT LAVSVDRKVP QPGVDIVPIE SYLRGRGLNP
LADRWLKAVN EADAGMRALT EPSAKAVDAA TKPLSRLKRL MEGEVAPALE VNIGFSDADG
D
|
|---|
| |