Gene Daci_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1525 
Symbol 
ID5747081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1711056 
End bp1712342 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content65% 
IMG OID641296605 
Productputative iron-regulated protein 
Protein accessionYP_001562554 
Protein GI160896972 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3487] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0217885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCGAT ATCTCGCAGG TTTTGCCAAT AAAAACAATT CTCATTACAG TTTGGCATTC 
CGAGTTCTCC AACCTCCGAT CCTTTCTGCC ATGCATCCCA TCCTGATTGC AGCCGCCCTG
GCCCTGGGCG CGGCCGCCCC GATGAGCCAG GCCGCAGCCG CCGGCACCGT TCAACAGCCC
GTGAAGAAGA GCCTCTCCGT TGCGGAGGTG GTCAAGCATT ACGGCACCCT GGTGCACGCC
AATTACTCGG ACTCCATCAG CTCCGCCAAG ACCATGCAGA AAGCCATTGC GGCCTTTCTG
GCGGCGCCCA GCGAGCAGGG CCTGAACCAG GCACGCAAGG CCTGGCTGGA TGCCCGGGAG
TACTACGGCC AGACCGAGGC CTTCCGCTTC TACGCCGGCC CCATCGACAA CGATCAAGGC
CCCGAAGGCC AGATCAACGC CTGGCCCATG GATGAGTCCT ATGTGGACTA TGTGGAAGGC
AACCCCAACG CCGGCATCAT CAACAACCGC AAGGAAGCCA TCACGAAGAA GCGCCTGGCC
GAGCTCAATG AGCATGACGG CGAGGAGAAT GTTTCCACCG GCTGGCACGC CATCGAGTTC
ATGCTCTGGG GCCAGGACCT GAACGACAAG GGGCCGGGCG CGCGTCCGTA CACCGACTTC
GTCGATGGCA AGAAGTCCAA TGCCGACCGC CGCCGCGAGT ACCTGAAGGT GGTGACCGCG
CTGCTGATCG AGGACCTGCA GTCCGTGGCC GACCAGTGGA AGCCCGGCTC GCCCAAGAAC
TTCCGCGCCC AGTTCGAGAA AAAGCCCGAC GACGCGCTGC GCCGCATCTT CGTGGGCCTG
GGTTCGCTGT CGCGCGGCGA GCTGGCCGGC GAGCGCCTGG AAGTGGCCCT GGCCAGCCGC
GACCAGGAAG ACGAGCACTC CTGCTTCTCG GACAACACGC ACCGCGATGC GGTGACCAAT
GCCCAGGGCA TCCTCAACGT CTGGCAGGGC AGCTACAAGC GCCTGGATGG CAGCGAGCTG
CAAGGCCCGG GCATCAAGGA CTGGGTGGCC TCCAAGGACA GCGCGCTGGC CGACAGGACC
ACGCGCCAGA TCACGCAGTC GGTGCAGGCG GCCCAGGCCA TTCCCGCGCC GTTCGACCAG
GCCATACAGG GCGCACGCGA CTCGGCCTCG CGCGCCAAGA TCCAGGCCAC CATCGACAGC
CTGGTCCAGC AGAGCAAGGA CCTGGTGGAG GCGGCCAATG CCGTCGGCAT CACCCAGCTC
AACCTGGTGG ACCCCAAGGC CAACTAA
 
Protein sequence
MRRYLAGFAN KNNSHYSLAF RVLQPPILSA MHPILIAAAL ALGAAAPMSQ AAAAGTVQQP 
VKKSLSVAEV VKHYGTLVHA NYSDSISSAK TMQKAIAAFL AAPSEQGLNQ ARKAWLDARE
YYGQTEAFRF YAGPIDNDQG PEGQINAWPM DESYVDYVEG NPNAGIINNR KEAITKKRLA
ELNEHDGEEN VSTGWHAIEF MLWGQDLNDK GPGARPYTDF VDGKKSNADR RREYLKVVTA
LLIEDLQSVA DQWKPGSPKN FRAQFEKKPD DALRRIFVGL GSLSRGELAG ERLEVALASR
DQEDEHSCFS DNTHRDAVTN AQGILNVWQG SYKRLDGSEL QGPGIKDWVA SKDSALADRT
TRQITQSVQA AQAIPAPFDQ AIQGARDSAS RAKIQATIDS LVQQSKDLVE AANAVGITQL
NLVDPKAN