| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1449 |
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| Symbol | |
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| ID | 5747005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1620214 |
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| End bp | 1622682 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296529 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001562478 |
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| Protein GI | 160896896 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAT TCCCCTCCAA GCCTTCCCGC CTTGCCTGCC ACCATGCCGT TGCGGCGGCC
ATCGCGCTGC TGGCCGTGCA GCTTTCTCCA GCCGCGCTGG CACAGGCGGC GCCGGTCACG
GCCGCCAGCA CCGACTTCCA CATTCCCGCC CAGCCGCTGG ACCAGGCGCT GGCCCAACTG
GCCCGCCAGG CTGGCCTGCA GCTGCTGGCC GCGCCTGAAC TGGTGCAGGG CCGCCGTGCG
CCCGCCGTGG AAGGGCGCCT GAGCACCGCC GCCGCCGTGG CCCGGCTGCT GCGCGGCAGC
GGGCTGGAAG GCCATGTGAG CCAGGGCACG CTGGTGGTGG AAAAGCCCGC CGGCACCGTG
GCCCTGCCCG AAGTCACGGT CTCCGCCGTG GGCGAGACCA CGACCACCGA GGGCTCGGGC
TCCTACACCA CGGGACTGAT GAGCACCTCG ACCAAGCTGC CGCTGTCCAT CCGCGAGACG
CCCCAGTCCC TCACCGTGGT CACGCGCCAG AAGATGGACG ACCAGGGCAT GCTGTCCATC
GACGACGTGG CCAACAGCGC CACCGGCATC ACCATCAACC GCTGGAGCGA CGACCGGGCG
CGCTATTTCT CGCGCGGGTT CGTGATCGGC TCCTTCCTGC AGGACGGCGT GCCCGTCTCG
TATGAAACCG ACACCTCCAC CTACGACACC ATGGCCATGT ACGACCACGT GGAAGTGGTG
CGCGGCCCCA CGGGGCTGAT GACGGGCGTG GGCGACCCTT CGGGCACCAT CAACTTCGTG
CGCAAGCGCG CGCCGCGCAC CACCCAGCGC TCGGTCACCC TGCGCGGCGG CAGCTGGAAC
CAGGCCGTGG GCGAGGTCGA TGTGGGCGGC GCCCTCAACG AGGACGGCTC GGCGCGCGGG
CGTGTGGTGG CCTCGGCCCA GTCGCGCGAC CACTTCATCG ATGGCTATAG CAGCCGCCGC
CAGCTGCTGT ACGGCACCGC CGAGTTCGAC CTGGGCCGCG ACACCATGCT GAGCGTGGGC
GGCTCCTATG TGAACGAAGA CAACCCCGGC TCGCAATGGA TGGGCGTGCC CATGGGCTTC
GATGGCTCCT TCCTCGACAT TGCGCGATCC AGGCGTTTCT CGCCCTCCTG GAGCAAATGG
GACAAGAAGG AGATCAGCCT GTTCGCCGAC CTGGAGCACC GCTTCGACAA CGGCTGGAAG
GCCAGGCTGG CCGCGCGCGC CCTGCAGGCC AAGTCCGCGC TGGACGGCGC CTACCTGGTC
TCGGGCGGCC TGGACGACCA GGGCCGCACG CGCTACGACG TGGCCGGCGG CCTCTACGAC
TACGACAGGC GCCAGCTCAG CCTCGATGCC TCGGCCCAGG GCCCCGTGCG CCTGTTCGGC
CGCGAGCATG ACCTGGCCTT CGGCGTCAGC CGCCGCACCA TCCGCTGGAG CGACCAGGGC
TACAGCTACC TGTCGCCCAC GGGGGAATGG CTGATCGCCA ATGGCGTCGA TCCCTATACC
TGGAACCCCG ACTCGCTGGA CCGCTCCGGC CTGCTGGCCG AAGACCTGTG GACGCGCCGC
CAGAAGACCA CGCTGACCTC GGCCTACGCC ACGGGCCGCT TCCTGCTGGC CGAGCCACTG
AACCTGATCG CCGGCACGCG CCTGGACTGG TACGACTTCA CCAACGTCCA GCGCCAGGGC
AGCTGGAGCC GGGAACGCGA ATTCAGCGAG AAAGCCCATG CCACGCCCTA TGCCGCGCTG
ACCTATGACA TCAACAAGAC CTACTCGGCC TATGCCAGCT ACACCAGCAT CTTCCGGCCG
CAGGATTTTC TGGATGTCTC GGGCAGCATG CTGGCGCCGG TGGAGGGCCG CAATTTCGAG
CTGGGCCTCA AGGGCAGCTA CCTGGACGAG CGCGTGAACC TGGCCGTTGC CGTGTTCAAA
ACCACGCAGG ACAACCTGCC CCAGGCCATC GCGGACATCA ACTCCTGCAC GGTGAAGACC
AATTGCTACC GCTCCGTCGG CAAGGTCAGG AGCAAGGGGC TGGACGTGGA CATTAGCGGT
GAGATCCTGC CGCGCCTGAA CGCCGGCCTT GGCTATACCT TCACCCAGGC CGAGATCGCC
AGCGACAGCA CCGAAGGCGC CAAGGGCGCG CCCTATGCCA GCTACACGCC GCGCCACCAG
CTCAAGCTGT CGGCCATGTA CCACCTGGGC GGCGAGCTGG GCGCATGGCG TGTGGGCGGC
GGCCTGCGCT ACCAGAGCCG CACCACGTCC GAGTCGCTGA CCAGCGCCGA AGGCTATGCA
ATCCGCCAGT CCGCCTATGC CGTGGCCGAC CTGGTCATCG GCTATCGGGT GAACCGGCAG
CTGGACCTGC AGATGAACAT CAGCAACCTG TTCGACCGCC GCTATTTCGA GACCCTGGGC
ACGAACAACG GCGGCAACTA TTTCGGCGTG CCGCGCAGGC TGCTGCTGAC GGCCAAATAC
CAGTTCTGA
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| Protein sequence | MSSFPSKPSR LACHHAVAAA IALLAVQLSP AALAQAAPVT AASTDFHIPA QPLDQALAQL
ARQAGLQLLA APELVQGRRA PAVEGRLSTA AAVARLLRGS GLEGHVSQGT LVVEKPAGTV
ALPEVTVSAV GETTTTEGSG SYTTGLMSTS TKLPLSIRET PQSLTVVTRQ KMDDQGMLSI
DDVANSATGI TINRWSDDRA RYFSRGFVIG SFLQDGVPVS YETDTSTYDT MAMYDHVEVV
RGPTGLMTGV GDPSGTINFV RKRAPRTTQR SVTLRGGSWN QAVGEVDVGG ALNEDGSARG
RVVASAQSRD HFIDGYSSRR QLLYGTAEFD LGRDTMLSVG GSYVNEDNPG SQWMGVPMGF
DGSFLDIARS RRFSPSWSKW DKKEISLFAD LEHRFDNGWK ARLAARALQA KSALDGAYLV
SGGLDDQGRT RYDVAGGLYD YDRRQLSLDA SAQGPVRLFG REHDLAFGVS RRTIRWSDQG
YSYLSPTGEW LIANGVDPYT WNPDSLDRSG LLAEDLWTRR QKTTLTSAYA TGRFLLAEPL
NLIAGTRLDW YDFTNVQRQG SWSREREFSE KAHATPYAAL TYDINKTYSA YASYTSIFRP
QDFLDVSGSM LAPVEGRNFE LGLKGSYLDE RVNLAVAVFK TTQDNLPQAI ADINSCTVKT
NCYRSVGKVR SKGLDVDISG EILPRLNAGL GYTFTQAEIA SDSTEGAKGA PYASYTPRHQ
LKLSAMYHLG GELGAWRVGG GLRYQSRTTS ESLTSAEGYA IRQSAYAVAD LVIGYRVNRQ
LDLQMNISNL FDRRYFETLG TNNGGNYFGV PRRLLLTAKY QF
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